Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.34■□□□□ 0.05
COL10A1Q03692 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COL10A1Q03692 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL10A1Q03692 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
COL10A1Q03692 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL10A1Q03692 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
COL10A1Q03692 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL10A1Q03692 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.33■□□□□ 0.05
COL10A1Q03692 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.33■□□□□ 0.05
COL10A1Q03692 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
COL10A1Q03692 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
COL10A1Q03692 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
COL10A1Q03692 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL10A1Q03692 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL10A1Q03692 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
COL10A1Q03692 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL10A1Q03692 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
COL10A1Q03692 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL10A1Q03692 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL10A1Q03692 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
COL10A1Q03692 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL10A1Q03692 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL10A1Q03692 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL10A1Q03692 AC113347.1-201ENST00000413321 391 ntBASIC15.33■□□□□ 0.04
COL10A1Q03692 AC211429.1-201ENST00000415277 523 ntBASIC15.33■□□□□ 0.04
COL10A1Q03692 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.33■□□□□ 0.04
COL10A1Q03692 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.33■□□□□ 0.04
COL10A1Q03692 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
COL10A1Q03692 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.33■□□□□ 0.04
COL10A1Q03692 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
COL10A1Q03692 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
COL10A1Q03692 AC140113.3-201ENST00000605663 199 ntBASIC15.33■□□□□ 0.04
COL10A1Q03692 AL023973.1-201ENST00000624619 620 ntBASIC15.33■□□□□ 0.04
COL10A1Q03692 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL10A1Q03692 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL10A1Q03692 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
COL10A1Q03692 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
COL10A1Q03692 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL10A1Q03692 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL10A1Q03692 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
COL10A1Q03692 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
COL10A1Q03692 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.33■□□□□ 0.04
COL10A1Q03692 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.33■□□□□ 0.04
COL10A1Q03692 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL10A1Q03692 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL10A1Q03692 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL10A1Q03692 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL10A1Q03692 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.32■□□□□ 0.04
COL10A1Q03692 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
COL10A1Q03692 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
COL10A1Q03692 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
COL10A1Q03692 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
COL10A1Q03692 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.32■□□□□ 0.04
COL10A1Q03692 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
COL10A1Q03692 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.32■□□□□ 0.04
COL10A1Q03692 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
COL10A1Q03692 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.32■□□□□ 0.04
COL10A1Q03692 MIR3917-201ENST00000580971 93 ntBASIC15.32■□□□□ 0.04
COL10A1Q03692 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
COL10A1Q03692 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.32■□□□□ 0.04
COL10A1Q03692 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.32■□□□□ 0.04
COL10A1Q03692 REXO1L9P-201ENST00000604264 2108 ntBASIC15.32■□□□□ 0.04
COL10A1Q03692 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
COL10A1Q03692 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.32■□□□□ 0.04
COL10A1Q03692 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
COL10A1Q03692 OR6D1P-202ENST00000641007 5290 ntBASIC15.32■□□□□ 0.04
COL10A1Q03692 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
COL10A1Q03692 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.32■□□□□ 0.04
COL10A1Q03692 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
COL10A1Q03692 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL10A1Q03692 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.32■□□□□ 0.04
COL10A1Q03692 PHGDH-209ENST00000641074 1780 ntBASIC15.31■□□□□ 0.04
COL10A1Q03692 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.31■□□□□ 0.04
COL10A1Q03692 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.31■□□□□ 0.04
COL10A1Q03692 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
COL10A1Q03692 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
COL10A1Q03692 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL10A1Q03692 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.31■□□□□ 0.04
COL10A1Q03692 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL10A1Q03692 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.31■□□□□ 0.04
COL10A1Q03692 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL10A1Q03692 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms