Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.22■□□□□ 0.35
GABREP78334 AL139424.1-201ENST00000607572 797 ntBASIC17.22■□□□□ 0.35
GABREP78334 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GABREP78334 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
GABREP78334 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
GABREP78334 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GABREP78334 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GABREP78334 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.22■□□□□ 0.35
GABREP78334 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.22■□□□□ 0.35
GABREP78334 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
GABREP78334 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.22■□□□□ 0.35
GABREP78334 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
GABREP78334 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GABREP78334 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GABREP78334 AP005117.1-201ENST00000584346 1413 ntBASIC17.21■□□□□ 0.35
GABREP78334 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GABREP78334 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
GABREP78334 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GABREP78334 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
GABREP78334 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GABREP78334 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GABREP78334 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GABREP78334 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.21■□□□□ 0.35
GABREP78334 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
GABREP78334 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GABREP78334 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GABREP78334 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GABREP78334 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
GABREP78334 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GABREP78334 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.21■□□□□ 0.35
GABREP78334 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.21■□□□□ 0.35
GABREP78334 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
GABREP78334 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.21■□□□□ 0.35
GABREP78334 OR7E14P-202ENST00000530490 1290 ntBASIC17.21■□□□□ 0.35
GABREP78334 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.21■□□□□ 0.35
GABREP78334 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.21■□□□□ 0.35
GABREP78334 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
GABREP78334 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.21■□□□□ 0.35
GABREP78334 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.21■□□□□ 0.35
GABREP78334 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.21■□□□□ 0.35
GABREP78334 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GABREP78334 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.21■□□□□ 0.34
GABREP78334 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.21■□□□□ 0.34
GABREP78334 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.21■□□□□ 0.34
GABREP78334 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
GABREP78334 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
GABREP78334 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GABREP78334 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
GABREP78334 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
GABREP78334 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.2■□□□□ 0.34
GABREP78334 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
GABREP78334 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.2■□□□□ 0.34
GABREP78334 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.2■□□□□ 0.34
GABREP78334 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.2■□□□□ 0.34
GABREP78334 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.2■□□□□ 0.34
GABREP78334 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.2■□□□□ 0.34
GABREP78334 AC034105.1-201ENST00000563488 319 ntBASIC17.2■□□□□ 0.34
GABREP78334 AC011467.2-201ENST00000598425 242 ntBASIC17.2■□□□□ 0.34
GABREP78334 AL138831.2-201ENST00000606564 490 ntBASIC17.2■□□□□ 0.34
GABREP78334 Z83851.2-201ENST00000609564 659 ntBASIC17.2■□□□□ 0.34
GABREP78334 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.2■□□□□ 0.34
GABREP78334 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.2■□□□□ 0.34
GABREP78334 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GABREP78334 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.2■□□□□ 0.34
GABREP78334 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.2■□□□□ 0.34
GABREP78334 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.2■□□□□ 0.34
GABREP78334 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
GABREP78334 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABREP78334 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GABREP78334 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.2■□□□□ 0.34
GABREP78334 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.2■□□□□ 0.34
GABREP78334 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.19■□□□□ 0.34
GABREP78334 AL356309.3-201ENST00000624132 1934 ntBASIC17.19■□□□□ 0.34
GABREP78334 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.19■□□□□ 0.34
GABREP78334 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GABREP78334 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
GABREP78334 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GABREP78334 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
GABREP78334 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.19■□□□□ 0.34
GABREP78334 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
GABREP78334 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms