Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDC42P60953 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.63■□□□□ 0.25
CDC42P60953 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDC42P60953 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CDC42P60953 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDC42P60953 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.63■□□□□ 0.25
CDC42P60953 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CDC42P60953 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.62■□□□□ 0.25
CDC42P60953 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CDC42P60953 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDC42P60953 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.62■□□□□ 0.25
CDC42P60953 AC124067.4-201ENST00000519691 2379 ntBASIC16.62■□□□□ 0.25
CDC42P60953 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CDC42P60953 AC004951.3-201ENST00000418645 1148 ntBASIC16.62■□□□□ 0.25
CDC42P60953 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.62■□□□□ 0.25
CDC42P60953 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.62■□□□□ 0.25
CDC42P60953 AC098934.4-201ENST00000564127 592 ntBASIC16.62■□□□□ 0.25
CDC42P60953 CKBP1-201ENST00000565489 1086 ntBASIC16.62■□□□□ 0.25
CDC42P60953 AC133041.1-202ENST00000642053 222 ntBASIC16.62■□□□□ 0.25
CDC42P60953 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.62■□□□□ 0.25
CDC42P60953 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.62■□□□□ 0.25
CDC42P60953 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CDC42P60953 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42P60953 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.62■□□□□ 0.25
CDC42P60953 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.61■□□□□ 0.25
CDC42P60953 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CDC42P60953 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDC42P60953 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 AC034236.2-201ENST00000606662 1610 ntBASIC16.61■□□□□ 0.25
CDC42P60953 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDC42P60953 MIR564-202ENST00000385049 94 ntBASIC16.61■□□□□ 0.25
CDC42P60953 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.61■□□□□ 0.25
CDC42P60953 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.61■□□□□ 0.25
CDC42P60953 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CDC42P60953 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.61■□□□□ 0.25
CDC42P60953 MTDHP1-201ENST00000605323 784 ntBASIC16.61■□□□□ 0.25
CDC42P60953 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CDC42P60953 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC42P60953 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.61■□□□□ 0.25
CDC42P60953 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDC42P60953 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CDC42P60953 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42P60953 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDC42P60953 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDC42P60953 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CDC42P60953 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CDC42P60953 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.6■□□□□ 0.25
CDC42P60953 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.6■□□□□ 0.25
CDC42P60953 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC42P60953 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC42P60953 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDC42P60953 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms