Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.31□□□□□ -0.28
APOC4P55056 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.31□□□□□ -0.28
APOC4P55056 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
APOC4P55056 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.31□□□□□ -0.28
APOC4P55056 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
APOC4P55056 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
APOC4P55056 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.31□□□□□ -0.28
APOC4P55056 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
APOC4P55056 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.31□□□□□ -0.28
APOC4P55056 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.3□□□□□ -0.28
APOC4P55056 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.3□□□□□ -0.28
APOC4P55056 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.3□□□□□ -0.28
APOC4P55056 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
APOC4P55056 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
APOC4P55056 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 AL024508.2-201ENST00000607749 1894 ntBASIC13.3□□□□□ -0.28
APOC4P55056 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.3□□□□□ -0.28
APOC4P55056 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.3□□□□□ -0.28
APOC4P55056 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.3□□□□□ -0.28
APOC4P55056 DUSP5P1-201ENST00000441325 1139 ntBASIC13.3□□□□□ -0.28
APOC4P55056 MINOS1P3-201ENST00000457048 203 ntBASIC13.3□□□□□ -0.28
APOC4P55056 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.3□□□□□ -0.28
APOC4P55056 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 AC074051.2-201ENST00000565115 352 ntBASIC13.3□□□□□ -0.28
APOC4P55056 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.3□□□□□ -0.28
APOC4P55056 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.3□□□□□ -0.28
APOC4P55056 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.3□□□□□ -0.28
APOC4P55056 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
APOC4P55056 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 AC233702.3-201ENST00000578656 1387 ntBASIC13.3□□□□□ -0.28
APOC4P55056 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC4P55056 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
APOC4P55056 AL499627.1-201ENST00000569373 2188 ntBASIC13.3□□□□□ -0.28
APOC4P55056 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC13.29□□□□□ -0.28
APOC4P55056 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC4P55056 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC4P55056 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC4P55056 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC4P55056 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.29□□□□□ -0.28
APOC4P55056 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC4P55056 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC4P55056 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC4P55056 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC4P55056 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
APOC4P55056 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC4P55056 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.29□□□□□ -0.28
APOC4P55056 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.29□□□□□ -0.28
APOC4P55056 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
APOC4P55056 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.29□□□□□ -0.28
APOC4P55056 AC009154.2-201ENST00000621177 724 ntBASIC13.29□□□□□ -0.28
APOC4P55056 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC4P55056 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC4P55056 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC4P55056 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC4P55056 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
APOC4P55056 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC4P55056 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC4P55056 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC4P55056 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.29□□□□□ -0.28
APOC4P55056 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC4P55056 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC4P55056 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
APOC4P55056 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC4P55056 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
APOC4P55056 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 AL031598.1-201ENST00000561511 1773 ntBASIC13.28□□□□□ -0.28
APOC4P55056 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
APOC4P55056 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.28□□□□□ -0.28
APOC4P55056 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 KRT17P6-201ENST00000453795 1220 ntBASIC13.28□□□□□ -0.28
APOC4P55056 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.28□□□□□ -0.28
APOC4P55056 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
APOC4P55056 RN7SL606P-201ENST00000472779 293 ntBASIC13.28□□□□□ -0.28
APOC4P55056 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.28□□□□□ -0.28
APOC4P55056 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms