Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLCNKAP51800 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CLCNKAP51800 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.79■□□□□ 0.44
CLCNKAP51800 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCNKAP51800 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCNKAP51800 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCNKAP51800 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.79■□□□□ 0.44
CLCNKAP51800 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLCNKAP51800 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCNKAP51800 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCNKAP51800 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLCNKAP51800 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCNKAP51800 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCNKAP51800 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCNKAP51800 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCNKAP51800 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCNKAP51800 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.78■□□□□ 0.44
CLCNKAP51800 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLCNKAP51800 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.78■□□□□ 0.44
CLCNKAP51800 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.78■□□□□ 0.44
CLCNKAP51800 AL353801.3-201ENST00000609898 542 ntBASIC17.78■□□□□ 0.44
CLCNKAP51800 AL592071.1-201ENST00000611956 408 ntBASIC17.78■□□□□ 0.44
CLCNKAP51800 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.78■□□□□ 0.44
CLCNKAP51800 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCNKAP51800 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCNKAP51800 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCNKAP51800 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCNKAP51800 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCNKAP51800 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCNKAP51800 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.78■□□□□ 0.44
CLCNKAP51800 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCNKAP51800 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCNKAP51800 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.77■□□□□ 0.44
CLCNKAP51800 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCNKAP51800 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CLCNKAP51800 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCNKAP51800 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCNKAP51800 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLCNKAP51800 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCNKAP51800 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCNKAP51800 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CLCNKAP51800 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCNKAP51800 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLCNKAP51800 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCNKAP51800 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCNKAP51800 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CLCNKAP51800 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCNKAP51800 AC246785.2-201ENST00000432512 513 ntBASIC17.77■□□□□ 0.44
CLCNKAP51800 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.77■□□□□ 0.44
CLCNKAP51800 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.77■□□□□ 0.44
CLCNKAP51800 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLCNKAP51800 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLCNKAP51800 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
CLCNKAP51800 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCNKAP51800 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCNKAP51800 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCNKAP51800 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLCNKAP51800 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLCNKAP51800 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLCNKAP51800 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLCNKAP51800 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.77■□□□□ 0.43
CLCNKAP51800 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.77■□□□□ 0.43
CLCNKAP51800 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLCNKAP51800 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCNKAP51800 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCNKAP51800 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCNKAP51800 AC104581.1-202ENST00000635932 2618 ntBASIC17.76■□□□□ 0.43
CLCNKAP51800 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCNKAP51800 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCNKAP51800 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCNKAP51800 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.76■□□□□ 0.43
CLCNKAP51800 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCNKAP51800 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCNKAP51800 NUS1P1-201ENST00000446295 882 ntBASIC17.76■□□□□ 0.43
CLCNKAP51800 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCNKAP51800 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.76■□□□□ 0.43
CLCNKAP51800 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.76■□□□□ 0.43
CLCNKAP51800 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.76■□□□□ 0.43
CLCNKAP51800 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.76■□□□□ 0.43
CLCNKAP51800 MIR3652-201ENST00000579335 131 ntBASIC17.76■□□□□ 0.43
CLCNKAP51800 CLEC4GP1-201ENST00000596555 870 ntBASIC17.76■□□□□ 0.43
CLCNKAP51800 AC124864.1-201ENST00000623408 392 ntBASIC17.76■□□□□ 0.43
CLCNKAP51800 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CLCNKAP51800 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCNKAP51800 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCNKAP51800 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCNKAP51800 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CLCNKAP51800 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCNKAP51800 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCNKAP51800 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCNKAP51800 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCNKAP51800 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CLCNKAP51800 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCNKAP51800 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCNKAP51800 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms