Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
LHX2P50458 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LHX2P50458 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LHX2P50458 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.17■□□□□ 0.18
LHX2P50458 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LHX2P50458 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LHX2P50458 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LHX2P50458 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LHX2P50458 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LHX2P50458 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LHX2P50458 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
LHX2P50458 MINOS1P3-201ENST00000457048 203 ntBASIC16.17■□□□□ 0.18
LHX2P50458 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.17■□□□□ 0.18
LHX2P50458 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.17■□□□□ 0.18
LHX2P50458 AC112698.1-201ENST00000510299 916 ntBASIC16.17■□□□□ 0.18
LHX2P50458 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.17■□□□□ 0.18
LHX2P50458 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.17■□□□□ 0.18
LHX2P50458 AC005336.2-201ENST00000593183 939 ntBASIC16.17■□□□□ 0.18
LHX2P50458 AC138894.3-201ENST00000603787 634 ntBASIC16.17■□□□□ 0.18
LHX2P50458 AL732292.2-201ENST00000609649 430 ntBASIC16.17■□□□□ 0.18
LHX2P50458 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.17■□□□□ 0.18
LHX2P50458 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LHX2P50458 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.17■□□□□ 0.18
LHX2P50458 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LHX2P50458 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.17■□□□□ 0.18
LHX2P50458 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LHX2P50458 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LHX2P50458 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LHX2P50458 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LHX2P50458 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LHX2P50458 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LHX2P50458 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LHX2P50458 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.16■□□□□ 0.18
LHX2P50458 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 AC090164.3-201ENST00000610780 2143 ntBASIC16.16■□□□□ 0.18
LHX2P50458 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LHX2P50458 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.16■□□□□ 0.18
LHX2P50458 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.16■□□□□ 0.18
LHX2P50458 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 AC135776.1-201ENST00000319817 2481 ntBASIC16.16■□□□□ 0.18
LHX2P50458 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.16■□□□□ 0.18
LHX2P50458 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.16■□□□□ 0.18
LHX2P50458 KRT18P31-201ENST00000506277 1292 ntBASIC16.16■□□□□ 0.18
LHX2P50458 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.16■□□□□ 0.18
LHX2P50458 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.16■□□□□ 0.18
LHX2P50458 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.16■□□□□ 0.18
LHX2P50458 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LHX2P50458 AL691432.3-201ENST00000621860 400 ntBASIC16.16■□□□□ 0.18
LHX2P50458 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.16■□□□□ 0.18
LHX2P50458 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.16■□□□□ 0.18
LHX2P50458 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.16■□□□□ 0.18
LHX2P50458 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.16■□□□□ 0.18
LHX2P50458 AL096828.2-201ENST00000567259 1965 ntBASIC16.16■□□□□ 0.18
LHX2P50458 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.16■□□□□ 0.18
LHX2P50458 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.16■□□□□ 0.18
LHX2P50458 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LHX2P50458 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LHX2P50458 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.16■□□□□ 0.18
LHX2P50458 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LHX2P50458 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.16■□□□□ 0.18
LHX2P50458 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LHX2P50458 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LHX2P50458 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LHX2P50458 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX2P50458 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LHX2P50458 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.15■□□□□ 0.18
LHX2P50458 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX2P50458 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX2P50458 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
LHX2P50458 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LHX2P50458 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.15■□□□□ 0.18
LHX2P50458 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX2P50458 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX2P50458 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LHX2P50458 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.15■□□□□ 0.18
LHX2P50458 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.15■□□□□ 0.18
LHX2P50458 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LHX2P50458 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX2P50458 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.15■□□□□ 0.18
LHX2P50458 UNC93B7-201ENST00000509439 705 ntBASIC16.15■□□□□ 0.18
LHX2P50458 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.15■□□□□ 0.18
LHX2P50458 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.15■□□□□ 0.18
LHX2P50458 AC091304.2-201ENST00000564639 760 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms