Protein–RNA interactions for Protein: P49918

CDKN1C, Cyclin-dependent kinase inhibitor 1C, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1CP49918 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CDKN1CP49918 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN1CP49918 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.06■□□□□ 0.48
CDKN1CP49918 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN1CP49918 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN1CP49918 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN1CP49918 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN1CP49918 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN1CP49918 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDKN1CP49918 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CDKN1CP49918 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKN1CP49918 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.05■□□□□ 0.48
CDKN1CP49918 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.05■□□□□ 0.48
CDKN1CP49918 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKN1CP49918 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKN1CP49918 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKN1CP49918 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKN1CP49918 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKN1CP49918 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKN1CP49918 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 LINC00602-201ENST00000629776 2065 ntBASIC18.05■□□□□ 0.48
CDKN1CP49918 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1CP49918 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKN1CP49918 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1CP49918 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CDKN1CP49918 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1CP49918 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDKN1CP49918 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1CP49918 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1CP49918 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1CP49918 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1CP49918 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1CP49918 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1CP49918 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKN1CP49918 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKN1CP49918 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.04■□□□□ 0.48
CDKN1CP49918 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.04■□□□□ 0.48
CDKN1CP49918 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKN1CP49918 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.04■□□□□ 0.48
CDKN1CP49918 NTF6B-201ENST00000591913 560 ntBASIC18.04■□□□□ 0.48
CDKN1CP49918 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
CDKN1CP49918 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CDKN1CP49918 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.04■□□□□ 0.48
CDKN1CP49918 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1CP49918 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKN1CP49918 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKN1CP49918 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKN1CP49918 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CDKN1CP49918 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CDKN1CP49918 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1CP49918 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1CP49918 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CDKN1CP49918 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN1CP49918 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.03■□□□□ 0.48
CDKN1CP49918 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN1CP49918 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN1CP49918 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKN1CP49918 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CDKN1CP49918 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN1CP49918 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKN1CP49918 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN1CP49918 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN1CP49918 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CDKN1CP49918 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN1CP49918 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN1CP49918 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.03■□□□□ 0.48
CDKN1CP49918 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.03■□□□□ 0.48
CDKN1CP49918 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.03■□□□□ 0.48
CDKN1CP49918 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN1CP49918 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.03■□□□□ 0.48
CDKN1CP49918 AL671277.2-201ENST00000458060 996 ntBASIC18.03■□□□□ 0.48
CDKN1CP49918 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.03■□□□□ 0.48
CDKN1CP49918 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.03■□□□□ 0.48
CDKN1CP49918 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKN1CP49918 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.03■□□□□ 0.48
CDKN1CP49918 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.03■□□□□ 0.48
CDKN1CP49918 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CDKN1CP49918 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.03■□□□□ 0.48
CDKN1CP49918 AC068880.1-201ENST00000507289 2297 ntBASIC18.03■□□□□ 0.48
CDKN1CP49918 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN1CP49918 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms