Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CX3CR1P49238 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CX3CR1P49238 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CX3CR1P49238 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CX3CR1P49238 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CX3CR1P49238 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CX3CR1P49238 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CX3CR1P49238 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CX3CR1P49238 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CX3CR1P49238 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CX3CR1P49238 TSPY15P-201ENST00000457163 923 ntBASIC15.98■□□□□ 0.15
CX3CR1P49238 NAPSB-206ENST00000562112 1266 ntBASIC15.98■□□□□ 0.15
CX3CR1P49238 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.98■□□□□ 0.15
CX3CR1P49238 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CX3CR1P49238 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CX3CR1P49238 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.98■□□□□ 0.15
CX3CR1P49238 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CX3CR1P49238 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CX3CR1P49238 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CX3CR1P49238 FLJ13224-201ENST00000313737 1514 ntBASIC15.98■□□□□ 0.15
CX3CR1P49238 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CX3CR1P49238 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CX3CR1P49238 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CX3CR1P49238 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CX3CR1P49238 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CX3CR1P49238 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CX3CR1P49238 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CX3CR1P49238 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CX3CR1P49238 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.97■□□□□ 0.15
CX3CR1P49238 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CX3CR1P49238 CYP2D8P-201ENST00000433633 1490 ntBASIC15.97■□□□□ 0.15
CX3CR1P49238 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CX3CR1P49238 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CX3CR1P49238 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CX3CR1P49238 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CX3CR1P49238 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.97■□□□□ 0.15
CX3CR1P49238 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CX3CR1P49238 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CX3CR1P49238 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
CX3CR1P49238 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CX3CR1P49238 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.97■□□□□ 0.15
CX3CR1P49238 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CX3CR1P49238 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CX3CR1P49238 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CX3CR1P49238 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CX3CR1P49238 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
CX3CR1P49238 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
CX3CR1P49238 KRT8P9-201ENST00000558927 1449 ntBASIC15.97■□□□□ 0.15
CX3CR1P49238 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.97■□□□□ 0.15
CX3CR1P49238 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.97■□□□□ 0.15
CX3CR1P49238 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.97■□□□□ 0.15
CX3CR1P49238 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.97■□□□□ 0.15
CX3CR1P49238 INGX-201ENST00000359239 846 ntBASIC15.97■□□□□ 0.15
CX3CR1P49238 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.97■□□□□ 0.15
CX3CR1P49238 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CX3CR1P49238 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.97■□□□□ 0.15
CX3CR1P49238 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.97■□□□□ 0.15
CX3CR1P49238 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.97■□□□□ 0.15
CX3CR1P49238 AC104390.1-201ENST00000555663 520 ntBASIC15.97■□□□□ 0.15
CX3CR1P49238 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.97■□□□□ 0.15
CX3CR1P49238 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CX3CR1P49238 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CX3CR1P49238 AC067852.2-201ENST00000590513 2313 ntBASIC15.97■□□□□ 0.15
CX3CR1P49238 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.97■□□□□ 0.15
CX3CR1P49238 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CX3CR1P49238 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CX3CR1P49238 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CX3CR1P49238 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CX3CR1P49238 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.97■□□□□ 0.15
CX3CR1P49238 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.96■□□□□ 0.15
CX3CR1P49238 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.96■□□□□ 0.15
CX3CR1P49238 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.96■□□□□ 0.15
CX3CR1P49238 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.96■□□□□ 0.15
CX3CR1P49238 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.96■□□□□ 0.15
CX3CR1P49238 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.96■□□□□ 0.15
CX3CR1P49238 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.96■□□□□ 0.15
CX3CR1P49238 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.96■□□□□ 0.15
CX3CR1P49238 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.96■□□□□ 0.15
CX3CR1P49238 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CX3CR1P49238 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.96■□□□□ 0.15
CX3CR1P49238 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CX3CR1P49238 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.96■□□□□ 0.15
CX3CR1P49238 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CX3CR1P49238 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms