Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
MMP13P45452 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MMP13P45452 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MMP13P45452 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP13P45452 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP13P45452 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.89■□□□□ 0.61
MMP13P45452 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.89■□□□□ 0.61
MMP13P45452 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
MMP13P45452 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MMP13P45452 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.89■□□□□ 0.61
MMP13P45452 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MMP13P45452 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MMP13P45452 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.89■□□□□ 0.61
MMP13P45452 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP13P45452 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
MMP13P45452 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
MMP13P45452 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.88■□□□□ 0.61
MMP13P45452 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MMP13P45452 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MMP13P45452 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MMP13P45452 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MMP13P45452 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MMP13P45452 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MMP13P45452 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MMP13P45452 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MMP13P45452 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
MMP13P45452 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.88■□□□□ 0.61
MMP13P45452 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.88■□□□□ 0.61
MMP13P45452 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.88■□□□□ 0.61
MMP13P45452 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.88■□□□□ 0.61
MMP13P45452 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MMP13P45452 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.88■□□□□ 0.61
MMP13P45452 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.88■□□□□ 0.61
MMP13P45452 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MMP13P45452 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.88■□□□□ 0.61
MMP13P45452 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MMP13P45452 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.88■□□□□ 0.61
MMP13P45452 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MMP13P45452 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.88■□□□□ 0.61
MMP13P45452 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MMP13P45452 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.88■□□□□ 0.61
MMP13P45452 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.88■□□□□ 0.61
MMP13P45452 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.88■□□□□ 0.61
MMP13P45452 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MMP13P45452 KRT8P50-201ENST00000562022 1438 ntBASIC18.88■□□□□ 0.61
MMP13P45452 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.88■□□□□ 0.61
MMP13P45452 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.88■□□□□ 0.61
MMP13P45452 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.88■□□□□ 0.61
MMP13P45452 MYLKP1-201ENST00000509077 1580 ntBASIC18.88■□□□□ 0.61
MMP13P45452 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MMP13P45452 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MMP13P45452 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MMP13P45452 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.88■□□□□ 0.61
MMP13P45452 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
MMP13P45452 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MMP13P45452 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MMP13P45452 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.87■□□□□ 0.61
MMP13P45452 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.87■□□□□ 0.61
MMP13P45452 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP13P45452 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP13P45452 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP13P45452 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MMP13P45452 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
MMP13P45452 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MMP13P45452 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
MMP13P45452 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP13P45452 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP13P45452 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.87■□□□□ 0.61
MMP13P45452 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.87■□□□□ 0.61
MMP13P45452 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP13P45452 AP000523.1-201ENST00000398242 1049 ntBASIC18.87■□□□□ 0.61
MMP13P45452 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MMP13P45452 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.87■□□□□ 0.61
MMP13P45452 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.87■□□□□ 0.61
MMP13P45452 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
MMP13P45452 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.87■□□□□ 0.61
MMP13P45452 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.87■□□□□ 0.61
MMP13P45452 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.87■□□□□ 0.61
MMP13P45452 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP13P45452 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP13P45452 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.87■□□□□ 0.61
MMP13P45452 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
MMP13P45452 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
MMP13P45452 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MMP13P45452 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.87■□□□□ 0.61
MMP13P45452 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP13P45452 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.87■□□□□ 0.61
MMP13P45452 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
MMP13P45452 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.87■□□□□ 0.61
MMP13P45452 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.86■□□□□ 0.61
MMP13P45452 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.86■□□□□ 0.61
MMP13P45452 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 AC073508.3-201ENST00000619697 1419 ntBASIC18.86■□□□□ 0.61
MMP13P45452 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms