Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF9P41273 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF9P41273 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF9P41273 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFSF9P41273 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFSF9P41273 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFSF9P41273 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.61■□□□□ 0.73
TNFSF9P41273 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF9P41273 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFSF9P41273 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF9P41273 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF9P41273 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFSF9P41273 AP000867.3-201ENST00000524675 377 ntBASIC19.61■□□□□ 0.73
TNFSF9P41273 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF9P41273 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFSF9P41273 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.61■□□□□ 0.73
TNFSF9P41273 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.61■□□□□ 0.73
TNFSF9P41273 AC009154.2-201ENST00000621177 724 ntBASIC19.61■□□□□ 0.73
TNFSF9P41273 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF9P41273 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF9P41273 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF9P41273 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF9P41273 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TNFSF9P41273 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF9P41273 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF9P41273 BICD1-207ENST00000551848 1962 ntBASIC19.61■□□□□ 0.73
TNFSF9P41273 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TNFSF9P41273 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TNFSF9P41273 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TNFSF9P41273 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF9P41273 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
TNFSF9P41273 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF9P41273 AC233702.3-201ENST00000578656 1387 ntBASIC19.6■□□□□ 0.73
TNFSF9P41273 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF9P41273 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF9P41273 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TNFSF9P41273 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF9P41273 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TNFSF9P41273 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.6■□□□□ 0.73
TNFSF9P41273 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TNFSF9P41273 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.6■□□□□ 0.73
TNFSF9P41273 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF9P41273 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TNFSF9P41273 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF9P41273 CLEC4GP1-201ENST00000596555 870 ntBASIC19.6■□□□□ 0.73
TNFSF9P41273 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF9P41273 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF9P41273 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF9P41273 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.6■□□□□ 0.73
TNFSF9P41273 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF9P41273 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF9P41273 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.6■□□□□ 0.73
TNFSF9P41273 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF9P41273 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNFSF9P41273 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.6■□□□□ 0.73
TNFSF9P41273 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.6■□□□□ 0.73
TNFSF9P41273 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TNFSF9P41273 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF9P41273 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.59■□□□□ 0.73
TNFSF9P41273 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF9P41273 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.59■□□□□ 0.73
TNFSF9P41273 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
TNFSF9P41273 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TNFSF9P41273 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.59■□□□□ 0.73
TNFSF9P41273 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF9P41273 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.59■□□□□ 0.73
TNFSF9P41273 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF9P41273 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.59■□□□□ 0.73
TNFSF9P41273 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF9P41273 KRT18P65-201ENST00000439811 1286 ntBASIC19.59■□□□□ 0.73
TNFSF9P41273 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.59■□□□□ 0.73
TNFSF9P41273 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TNFSF9P41273 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TNFSF9P41273 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF9P41273 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF9P41273 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.59■□□□□ 0.73
TNFSF9P41273 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
TNFSF9P41273 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.59■□□□□ 0.73
TNFSF9P41273 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF9P41273 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF9P41273 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFSF9P41273 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF9P41273 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.58■□□□□ 0.73
TNFSF9P41273 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF9P41273 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF9P41273 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF9P41273 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF9P41273 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF9P41273 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.58■□□□□ 0.73
TNFSF9P41273 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF9P41273 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
TNFSF9P41273 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TNFSF9P41273 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TNFSF9P41273 MTCL1P1-201ENST00000446207 792 ntBASIC19.58■□□□□ 0.72
TNFSF9P41273 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.58■□□□□ 0.72
TNFSF9P41273 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFSF9P41273 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.58■□□□□ 0.72
TNFSF9P41273 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TNFSF9P41273 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.58■□□□□ 0.72
TNFSF9P41273 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms