Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.84■□□□□ 0.13
GDNFP39905 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.84■□□□□ 0.13
GDNFP39905 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
GDNFP39905 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 GCSHP5-201ENST00000443090 522 ntBASIC15.84■□□□□ 0.13
GDNFP39905 AL158047.1-201ENST00000445918 881 ntBASIC15.84■□□□□ 0.13
GDNFP39905 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.84■□□□□ 0.13
GDNFP39905 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.84■□□□□ 0.13
GDNFP39905 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.84■□□□□ 0.13
GDNFP39905 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
GDNFP39905 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
GDNFP39905 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
GDNFP39905 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.84■□□□□ 0.13
GDNFP39905 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
GDNFP39905 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
GDNFP39905 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
GDNFP39905 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GDNFP39905 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
GDNFP39905 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GDNFP39905 AL023806.1-201ENST00000603994 1649 ntBASIC15.83■□□□□ 0.13
GDNFP39905 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GDNFP39905 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
GDNFP39905 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GDNFP39905 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
GDNFP39905 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
GDNFP39905 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.83■□□□□ 0.13
GDNFP39905 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
GDNFP39905 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GDNFP39905 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
GDNFP39905 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GDNFP39905 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GDNFP39905 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
GDNFP39905 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.83■□□□□ 0.12
GDNFP39905 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
GDNFP39905 RPS2P4-201ENST00000476944 856 ntBASIC15.83■□□□□ 0.12
GDNFP39905 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GDNFP39905 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.83■□□□□ 0.12
GDNFP39905 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.83■□□□□ 0.12
GDNFP39905 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GDNFP39905 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GDNFP39905 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.83■□□□□ 0.12
GDNFP39905 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GDNFP39905 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.83■□□□□ 0.12
GDNFP39905 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.83■□□□□ 0.12
GDNFP39905 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.83■□□□□ 0.12
GDNFP39905 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.83■□□□□ 0.12
GDNFP39905 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
GDNFP39905 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
GDNFP39905 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
GDNFP39905 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GDNFP39905 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GDNFP39905 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
GDNFP39905 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GDNFP39905 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
GDNFP39905 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GDNFP39905 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
GDNFP39905 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
GDNFP39905 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
GDNFP39905 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.82■□□□□ 0.12
GDNFP39905 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
GDNFP39905 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
GDNFP39905 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
GDNFP39905 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
GDNFP39905 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.82■□□□□ 0.12
GDNFP39905 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
GDNFP39905 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.82■□□□□ 0.12
GDNFP39905 AL160286.2-201ENST00000567150 934 ntBASIC15.82■□□□□ 0.12
GDNFP39905 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
GDNFP39905 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
GDNFP39905 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms