Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC22.92■■□□□ 1.26
COL15A1P39059 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC22.92■■□□□ 1.26
COL15A1P39059 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.92■■□□□ 1.26
COL15A1P39059 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.92■■□□□ 1.26
COL15A1P39059 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC22.92■■□□□ 1.26
COL15A1P39059 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL15A1P39059 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
COL15A1P39059 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL15A1P39059 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
COL15A1P39059 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL15A1P39059 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL15A1P39059 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL15A1P39059 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL15A1P39059 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL15A1P39059 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL15A1P39059 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC22.91■■□□□ 1.26
COL15A1P39059 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC22.91■■□□□ 1.26
COL15A1P39059 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.91■■□□□ 1.26
COL15A1P39059 Z83851.2-201ENST00000609564 659 ntBASIC22.91■■□□□ 1.26
COL15A1P39059 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.91■■□□□ 1.26
COL15A1P39059 AC008735.5-201ENST00000623544 497 ntBASIC22.91■■□□□ 1.26
COL15A1P39059 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL15A1P39059 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL15A1P39059 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL15A1P39059 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL15A1P39059 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL15A1P39059 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL15A1P39059 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
COL15A1P39059 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.91■■□□□ 1.26
COL15A1P39059 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.91■■□□□ 1.26
COL15A1P39059 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL15A1P39059 AC005104.2-201ENST00000427818 678 ntBASIC22.9■■□□□ 1.26
COL15A1P39059 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC22.9■■□□□ 1.26
COL15A1P39059 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC22.9■■□□□ 1.26
COL15A1P39059 NMU-202ENST00000505262 693 ntTSL 3 BASIC22.9■■□□□ 1.26
COL15A1P39059 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC22.9■■□□□ 1.26
COL15A1P39059 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL15A1P39059 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC22.9■■□□□ 1.26
COL15A1P39059 AC098818.2-201ENST00000564925 2320 ntBASIC22.9■■□□□ 1.26
COL15A1P39059 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL15A1P39059 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL15A1P39059 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL15A1P39059 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL15A1P39059 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL15A1P39059 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
COL15A1P39059 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC22.9■■□□□ 1.26
COL15A1P39059 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.9■■□□□ 1.26
COL15A1P39059 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC22.9■■□□□ 1.26
COL15A1P39059 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.9■■□□□ 1.26
COL15A1P39059 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
COL15A1P39059 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
COL15A1P39059 AL591424.1-201ENST00000442569 1213 ntBASIC22.89■■□□□ 1.26
COL15A1P39059 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC22.89■■□□□ 1.26
COL15A1P39059 RNA5SP415-201ENST00000517246 115 ntBASIC22.89■■□□□ 1.26
COL15A1P39059 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.26
COL15A1P39059 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
COL15A1P39059 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC22.89■■□□□ 1.26
COL15A1P39059 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.89■■□□□ 1.26
COL15A1P39059 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
COL15A1P39059 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.89■■□□□ 1.26
COL15A1P39059 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL15A1P39059 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL15A1P39059 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL15A1P39059 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.89■■□□□ 1.25
COL15A1P39059 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL15A1P39059 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL15A1P39059 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.89■■□□□ 1.25
COL15A1P39059 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC22.89■■□□□ 1.25
COL15A1P39059 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC22.89■■□□□ 1.25
COL15A1P39059 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC22.89■■□□□ 1.25
COL15A1P39059 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC22.89■■□□□ 1.25
COL15A1P39059 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC22.89■■□□□ 1.25
COL15A1P39059 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL15A1P39059 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.88■■□□□ 1.25
COL15A1P39059 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
COL15A1P39059 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.88■■□□□ 1.25
COL15A1P39059 AC018445.3-201ENST00000624177 1945 ntBASIC22.88■■□□□ 1.25
COL15A1P39059 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL15A1P39059 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL15A1P39059 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL15A1P39059 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL15A1P39059 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.88■■□□□ 1.25
COL15A1P39059 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
COL15A1P39059 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
COL15A1P39059 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL15A1P39059 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL15A1P39059 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL15A1P39059 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL15A1P39059 AC112698.1-201ENST00000510299 916 ntBASIC22.88■■□□□ 1.25
COL15A1P39059 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC22.88■■□□□ 1.25
COL15A1P39059 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL15A1P39059 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
COL15A1P39059 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC22.88■■□□□ 1.25
COL15A1P39059 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC22.88■■□□□ 1.25
COL15A1P39059 AC010327.4-202ENST00000591484 748 ntBASIC22.88■■□□□ 1.25
COL15A1P39059 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL15A1P39059 AL691403.2-201ENST00000618460 490 ntBASIC22.88■■□□□ 1.25
COL15A1P39059 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL15A1P39059 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC22.88■■□□□ 1.25
COL15A1P39059 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms