Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 AC092338.2-201ENST00000568827 1415 ntBASIC17.78■□□□□ 0.44
SOX11P35716 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.78■□□□□ 0.44
SOX11P35716 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SOX11P35716 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SOX11P35716 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX11P35716 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX11P35716 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX11P35716 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SOX11P35716 AC073592.3-201ENST00000625118 1834 ntBASIC17.77■□□□□ 0.44
SOX11P35716 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX11P35716 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX11P35716 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX11P35716 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SOX11P35716 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX11P35716 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.77■□□□□ 0.44
SOX11P35716 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX11P35716 AC007663.1-201ENST00000438948 1240 ntBASIC17.77■□□□□ 0.44
SOX11P35716 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SOX11P35716 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.77■□□□□ 0.44
SOX11P35716 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.77■□□□□ 0.44
SOX11P35716 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.77■□□□□ 0.44
SOX11P35716 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX11P35716 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SOX11P35716 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SOX11P35716 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
SOX11P35716 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SOX11P35716 AC135776.1-201ENST00000319817 2481 ntBASIC17.77■□□□□ 0.43
SOX11P35716 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SOX11P35716 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SOX11P35716 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SOX11P35716 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.77■□□□□ 0.43
SOX11P35716 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SOX11P35716 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.76■□□□□ 0.43
SOX11P35716 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.76■□□□□ 0.43
SOX11P35716 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.76■□□□□ 0.43
SOX11P35716 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.76■□□□□ 0.43
SOX11P35716 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SOX11P35716 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.76■□□□□ 0.43
SOX11P35716 BX664615.1-201ENST00000443558 458 ntBASIC17.76■□□□□ 0.43
SOX11P35716 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.76■□□□□ 0.43
SOX11P35716 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.76■□□□□ 0.43
SOX11P35716 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.76■□□□□ 0.43
SOX11P35716 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SOX11P35716 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX11P35716 AC139713.2-201ENST00000641328 2723 ntBASIC17.76■□□□□ 0.43
SOX11P35716 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
SOX11P35716 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SOX11P35716 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.75■□□□□ 0.43
SOX11P35716 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 CROCCP1-201ENST00000426910 5675 ntBASIC17.75■□□□□ 0.43
SOX11P35716 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
SOX11P35716 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.75■□□□□ 0.43
SOX11P35716 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SOX11P35716 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.75■□□□□ 0.43
SOX11P35716 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.75■□□□□ 0.43
SOX11P35716 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
SOX11P35716 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SOX11P35716 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SOX11P35716 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.75■□□□□ 0.43
SOX11P35716 CKBP1-201ENST00000565489 1086 ntBASIC17.75■□□□□ 0.43
SOX11P35716 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.75■□□□□ 0.43
SOX11P35716 AL138966.2-201ENST00000621997 464 ntBASIC17.75■□□□□ 0.43
SOX11P35716 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SOX11P35716 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX11P35716 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms