Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC010460.3-201ENST00000511359 1579 ntBASIC20.38■□□□□ 0.85
CTGFP29279 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CTGFP29279 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.38■□□□□ 0.85
CTGFP29279 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.38■□□□□ 0.85
CTGFP29279 SIGLEC16-201ENST00000599858 1437 ntBASIC20.38■□□□□ 0.85
CTGFP29279 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTGFP29279 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.38■□□□□ 0.85
CTGFP29279 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTGFP29279 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTGFP29279 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
CTGFP29279 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTGFP29279 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.38■□□□□ 0.85
CTGFP29279 ELK2BP-201ENST00000415014 1224 ntBASIC20.38■□□□□ 0.85
CTGFP29279 HCG4B-203ENST00000450128 991 ntBASIC20.38■□□□□ 0.85
CTGFP29279 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.38■□□□□ 0.85
CTGFP29279 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.38■□□□□ 0.85
CTGFP29279 SPCS2P1-201ENST00000561636 679 ntBASIC20.38■□□□□ 0.85
CTGFP29279 AL031432.2-201ENST00000566714 459 ntBASIC20.38■□□□□ 0.85
CTGFP29279 AL928711.1-201ENST00000570165 459 ntBASIC20.38■□□□□ 0.85
CTGFP29279 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTGFP29279 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTGFP29279 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.38■□□□□ 0.85
CTGFP29279 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTGFP29279 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.38■□□□□ 0.85
CTGFP29279 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTGFP29279 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTGFP29279 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTGFP29279 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.38■□□□□ 0.85
CTGFP29279 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTGFP29279 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.37■□□□□ 0.85
CTGFP29279 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTGFP29279 GPR89P-201ENST00000407924 1495 ntBASIC20.37■□□□□ 0.85
CTGFP29279 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTGFP29279 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTGFP29279 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CTGFP29279 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTGFP29279 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTGFP29279 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.37■□□□□ 0.85
CTGFP29279 CRYGEP-201ENST00000412192 528 ntBASIC20.37■□□□□ 0.85
CTGFP29279 SPDYE21P-201ENST00000413323 827 ntBASIC20.37■□□□□ 0.85
CTGFP29279 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.37■□□□□ 0.85
CTGFP29279 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CTGFP29279 AC108073.2-201ENST00000464002 357 ntBASIC20.37■□□□□ 0.85
CTGFP29279 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CTGFP29279 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.37■□□□□ 0.85
CTGFP29279 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.37■□□□□ 0.85
CTGFP29279 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.37■□□□□ 0.85
CTGFP29279 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.37■□□□□ 0.85
CTGFP29279 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CTGFP29279 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.37■□□□□ 0.85
CTGFP29279 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTGFP29279 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTGFP29279 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTGFP29279 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CTGFP29279 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CTGFP29279 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CTGFP29279 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.37■□□□□ 0.85
CTGFP29279 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTGFP29279 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTGFP29279 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTGFP29279 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTGFP29279 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CTGFP29279 AC005082.1-201ENST00000413042 2259 ntBASIC20.36■□□□□ 0.85
CTGFP29279 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTGFP29279 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTGFP29279 AL139400.1-201ENST00000366220 510 ntBASIC20.36■□□□□ 0.85
CTGFP29279 VN2R19P-201ENST00000442399 1052 ntBASIC20.36■□□□□ 0.85
CTGFP29279 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTGFP29279 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.36■□□□□ 0.85
CTGFP29279 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.36■□□□□ 0.85
CTGFP29279 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.36■□□□□ 0.85
CTGFP29279 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.36■□□□□ 0.85
CTGFP29279 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.36■□□□□ 0.85
CTGFP29279 AC004706.3-202ENST00000621574 984 ntBASIC20.36■□□□□ 0.85
CTGFP29279 AC093028.1-201ENST00000622998 982 ntBASIC20.36■□□□□ 0.85
CTGFP29279 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.36■□□□□ 0.85
CTGFP29279 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTGFP29279 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTGFP29279 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTGFP29279 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.36■□□□□ 0.85
CTGFP29279 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.36■□□□□ 0.85
CTGFP29279 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTGFP29279 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTGFP29279 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTGFP29279 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.35■□□□□ 0.85
CTGFP29279 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTGFP29279 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.35■□□□□ 0.85
CTGFP29279 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CTGFP29279 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTGFP29279 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.35■□□□□ 0.85
CTGFP29279 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.35■□□□□ 0.85
CTGFP29279 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTGFP29279 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
CTGFP29279 MKNK2P1-201ENST00000437526 628 ntBASIC20.35■□□□□ 0.85
CTGFP29279 CEND1P1-201ENST00000451006 455 ntBASIC20.35■□□□□ 0.85
CTGFP29279 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.35■□□□□ 0.85
CTGFP29279 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.35■□□□□ 0.85
CTGFP29279 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.35■□□□□ 0.85
CTGFP29279 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
CTGFP29279 AC093484.2-201ENST00000580996 2166 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms