Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.31■□□□□ 0.52
CCND1P24385 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCND1P24385 AC083906.6-201ENST00000641366 219 ntBASIC18.31■□□□□ 0.52
CCND1P24385 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCND1P24385 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCND1P24385 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCND1P24385 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CCND1P24385 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCND1P24385 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CCND1P24385 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCND1P24385 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.31■□□□□ 0.52
CCND1P24385 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCND1P24385 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CCND1P24385 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.31■□□□□ 0.52
CCND1P24385 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.31■□□□□ 0.52
CCND1P24385 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.3■□□□□ 0.52
CCND1P24385 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.3■□□□□ 0.52
CCND1P24385 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 AL391005.1-201ENST00000623953 2435 ntBASIC18.3■□□□□ 0.52
CCND1P24385 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CCND1P24385 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CCND1P24385 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.3■□□□□ 0.52
CCND1P24385 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.3■□□□□ 0.52
CCND1P24385 CRYGFP-201ENST00000418459 633 ntBASIC18.3■□□□□ 0.52
CCND1P24385 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.3■□□□□ 0.52
CCND1P24385 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.3■□□□□ 0.52
CCND1P24385 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.3■□□□□ 0.52
CCND1P24385 AC066615.1-201ENST00000640911 628 ntBASIC18.3■□□□□ 0.52
CCND1P24385 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.3■□□□□ 0.52
CCND1P24385 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.3■□□□□ 0.52
CCND1P24385 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCND1P24385 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCND1P24385 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 NKILA-202ENST00000614771 2598 ntBASIC18.3■□□□□ 0.52
CCND1P24385 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCND1P24385 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCND1P24385 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCND1P24385 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCND1P24385 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCND1P24385 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCND1P24385 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCND1P24385 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCND1P24385 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCND1P24385 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCND1P24385 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCND1P24385 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCND1P24385 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCND1P24385 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCND1P24385 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.29■□□□□ 0.52
CCND1P24385 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCND1P24385 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCND1P24385 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.29■□□□□ 0.52
CCND1P24385 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.29■□□□□ 0.52
CCND1P24385 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.29■□□□□ 0.52
CCND1P24385 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.29■□□□□ 0.52
CCND1P24385 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.29■□□□□ 0.52
CCND1P24385 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCND1P24385 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCND1P24385 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
CCND1P24385 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.29■□□□□ 0.52
CCND1P24385 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCND1P24385 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCND1P24385 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.29■□□□□ 0.52
CCND1P24385 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCND1P24385 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCND1P24385 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCND1P24385 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCND1P24385 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCND1P24385 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.28■□□□□ 0.52
CCND1P24385 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCND1P24385 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCND1P24385 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCND1P24385 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCND1P24385 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCND1P24385 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCND1P24385 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCND1P24385 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCND1P24385 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCND1P24385 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCND1P24385 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms