Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCL1P22362 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCL1P22362 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.63■□□□□ 0.09
CCL1P22362 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CCL1P22362 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL1P22362 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL1P22362 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CCL1P22362 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.63■□□□□ 0.09
CCL1P22362 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCL1P22362 MMP23A-201ENST00000234610 1017 ntBASIC15.63■□□□□ 0.09
CCL1P22362 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.63■□□□□ 0.09
CCL1P22362 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL1P22362 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.63■□□□□ 0.09
CCL1P22362 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.63■□□□□ 0.09
CCL1P22362 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CCL1P22362 AP000523.1-201ENST00000398242 1049 ntBASIC15.63■□□□□ 0.09
CCL1P22362 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL1P22362 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.63■□□□□ 0.09
CCL1P22362 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.63■□□□□ 0.09
CCL1P22362 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.63■□□□□ 0.09
CCL1P22362 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.63■□□□□ 0.09
CCL1P22362 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CCL1P22362 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.63■□□□□ 0.09
CCL1P22362 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.63■□□□□ 0.09
CCL1P22362 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.63■□□□□ 0.09
CCL1P22362 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
CCL1P22362 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL1P22362 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CCL1P22362 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL1P22362 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL1P22362 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CCL1P22362 AC022898.2-201ENST00000616822 1312 ntBASIC15.63■□□□□ 0.09
CCL1P22362 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL1P22362 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.63■□□□□ 0.09
CCL1P22362 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.63■□□□□ 0.09
CCL1P22362 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.62■□□□□ 0.09
CCL1P22362 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.62■□□□□ 0.09
CCL1P22362 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CCL1P22362 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.62■□□□□ 0.09
CCL1P22362 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CCL1P22362 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CCL1P22362 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CCL1P22362 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.62■□□□□ 0.09
CCL1P22362 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.62■□□□□ 0.09
CCL1P22362 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.62■□□□□ 0.09
CCL1P22362 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.62■□□□□ 0.09
CCL1P22362 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.62■□□□□ 0.09
CCL1P22362 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.62■□□□□ 0.09
CCL1P22362 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.62■□□□□ 0.09
CCL1P22362 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CCL1P22362 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.62■□□□□ 0.09
CCL1P22362 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.62■□□□□ 0.09
CCL1P22362 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCL1P22362 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.61■□□□□ 0.09
CCL1P22362 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.61■□□□□ 0.09
CCL1P22362 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCL1P22362 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCL1P22362 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCL1P22362 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCL1P22362 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCL1P22362 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCL1P22362 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CCL1P22362 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
CCL1P22362 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCL1P22362 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.61■□□□□ 0.09
CCL1P22362 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CCL1P22362 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.61■□□□□ 0.09
CCL1P22362 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCL1P22362 ECEL1P3-201ENST00000427961 737 ntBASIC15.61■□□□□ 0.09
CCL1P22362 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCL1P22362 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.61■□□□□ 0.09
CCL1P22362 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.61■□□□□ 0.09
CCL1P22362 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.61■□□□□ 0.09
CCL1P22362 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCL1P22362 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.61■□□□□ 0.09
CCL1P22362 AC113404.2-201ENST00000507884 177 ntBASIC15.61■□□□□ 0.09
CCL1P22362 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.61■□□□□ 0.09
CCL1P22362 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.61■□□□□ 0.09
CCL1P22362 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.61■□□□□ 0.09
CCL1P22362 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CCL1P22362 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CCL1P22362 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCL1P22362 AC100803.2-201ENST00000562459 1963 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms