Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC22.14■■□□□ 1.13
KCNA3P22001 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC22.14■■□□□ 1.13
KCNA3P22001 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC22.14■■□□□ 1.13
KCNA3P22001 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.14■■□□□ 1.13
KCNA3P22001 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KCNA3P22001 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KCNA3P22001 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KCNA3P22001 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
KCNA3P22001 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
KCNA3P22001 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC22.14■■□□□ 1.13
KCNA3P22001 AL157384.1-201ENST00000445995 2473 ntBASIC22.14■■□□□ 1.13
KCNA3P22001 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KCNA3P22001 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.14■■□□□ 1.13
KCNA3P22001 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
KCNA3P22001 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
KCNA3P22001 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
KCNA3P22001 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
KCNA3P22001 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
KCNA3P22001 PTMS-202ENST00000389462 773 ntTSL 2 BASIC22.13■■□□□ 1.13
KCNA3P22001 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
KCNA3P22001 TSEN15P1-201ENST00000423257 515 ntBASIC22.13■■□□□ 1.13
KCNA3P22001 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC22.13■■□□□ 1.13
KCNA3P22001 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC22.13■■□□□ 1.13
KCNA3P22001 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC22.13■■□□□ 1.13
KCNA3P22001 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC22.13■■□□□ 1.13
KCNA3P22001 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC22.13■■□□□ 1.13
KCNA3P22001 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC22.13■■□□□ 1.13
KCNA3P22001 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
KCNA3P22001 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC22.13■■□□□ 1.13
KCNA3P22001 AL589182.2-201ENST00000619332 1049 ntBASIC22.13■■□□□ 1.13
KCNA3P22001 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC22.13■■□□□ 1.13
KCNA3P22001 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
KCNA3P22001 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
KCNA3P22001 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.13■■□□□ 1.13
KCNA3P22001 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.13■■□□□ 1.13
KCNA3P22001 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
KCNA3P22001 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
KCNA3P22001 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
KCNA3P22001 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
KCNA3P22001 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
KCNA3P22001 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
KCNA3P22001 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
KCNA3P22001 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
KCNA3P22001 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
KCNA3P22001 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
KCNA3P22001 IGLL3P-201ENST00000412472 434 ntBASIC22.12■■□□□ 1.13
KCNA3P22001 ELK2BP-201ENST00000415014 1224 ntBASIC22.12■■□□□ 1.13
KCNA3P22001 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
KCNA3P22001 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC22.12■■□□□ 1.13
KCNA3P22001 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC22.12■■□□□ 1.13
KCNA3P22001 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC22.12■■□□□ 1.13
KCNA3P22001 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
KCNA3P22001 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC22.12■■□□□ 1.13
KCNA3P22001 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC22.12■■□□□ 1.13
KCNA3P22001 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
KCNA3P22001 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
KCNA3P22001 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.12■■□□□ 1.13
KCNA3P22001 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
KCNA3P22001 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNA3P22001 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNA3P22001 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
KCNA3P22001 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.11■■□□□ 1.13
KCNA3P22001 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
KCNA3P22001 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.11■■□□□ 1.13
KCNA3P22001 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNA3P22001 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNA3P22001 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNA3P22001 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNA3P22001 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNA3P22001 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC22.11■■□□□ 1.13
KCNA3P22001 PRSS29P-201ENST00000440800 595 ntBASIC22.11■■□□□ 1.13
KCNA3P22001 HLA-J-202ENST00000469281 1241 ntBASIC22.11■■□□□ 1.13
KCNA3P22001 IGHV3-65-201ENST00000523210 341 ntBASIC22.11■■□□□ 1.13
KCNA3P22001 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC22.11■■□□□ 1.13
KCNA3P22001 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC22.11■■□□□ 1.13
KCNA3P22001 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNA3P22001 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.11■■□□□ 1.13
KCNA3P22001 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.11■■□□□ 1.13
KCNA3P22001 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.11■■□□□ 1.13
KCNA3P22001 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.11■■□□□ 1.13
KCNA3P22001 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KCNA3P22001 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNA3P22001 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNA3P22001 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNA3P22001 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.1■■□□□ 1.13
KCNA3P22001 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNA3P22001 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC22.1■■□□□ 1.13
KCNA3P22001 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNA3P22001 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
KCNA3P22001 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
KCNA3P22001 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNA3P22001 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNA3P22001 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC22.1■■□□□ 1.13
KCNA3P22001 AC138761.1-201ENST00000584393 385 ntBASIC22.1■■□□□ 1.13
KCNA3P22001 AC093512.1-201ENST00000617969 520 ntBASIC22.1■■□□□ 1.13
KCNA3P22001 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
KCNA3P22001 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC22.1■■□□□ 1.13
KCNA3P22001 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
KCNA3P22001 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.1■■□□□ 1.13
KCNA3P22001 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms