Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 AC099398.1-201ENST00000567919 2776 ntBASIC16.9■□□□□ 0.3
TNFRSF1BP20333 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TNFRSF1BP20333 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 RPS2P55-201ENST00000397318 883 ntBASIC16.89■□□□□ 0.29
TNFRSF1BP20333 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 KRT18P23-201ENST00000435622 1283 ntBASIC16.89■□□□□ 0.29
TNFRSF1BP20333 AL158047.1-201ENST00000445918 881 ntBASIC16.89■□□□□ 0.29
TNFRSF1BP20333 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 AC107956.1-201ENST00000494359 873 ntBASIC16.89■□□□□ 0.29
TNFRSF1BP20333 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 AC142381.4-202ENST00000563973 229 ntBASIC16.89■□□□□ 0.29
TNFRSF1BP20333 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 AC141586.5-201ENST00000624546 2050 ntBASIC16.89■□□□□ 0.29
TNFRSF1BP20333 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
TNFRSF1BP20333 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 ABHD17AP1-201ENST00000358206 933 ntBASIC16.88■□□□□ 0.29
TNFRSF1BP20333 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 CA15P1-201ENST00000481698 905 ntBASIC16.88■□□□□ 0.29
TNFRSF1BP20333 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 AC093010.1-201ENST00000473625 1624 ntBASIC16.88■□□□□ 0.29
TNFRSF1BP20333 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF1BP20333 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 AP003041.3-201ENST00000527151 707 ntBASIC16.87■□□□□ 0.29
TNFRSF1BP20333 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFRSF1BP20333 AC009053.2-201ENST00000563701 2365 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms