Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKB1P19838 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NFKB1P19838 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NFKB1P19838 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NFKB1P19838 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NFKB1P19838 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NFKB1P19838 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NFKB1P19838 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.48■□□□□ 0.55
NFKB1P19838 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NFKB1P19838 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NFKB1P19838 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.48■□□□□ 0.55
NFKB1P19838 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.48■□□□□ 0.55
NFKB1P19838 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.48■□□□□ 0.55
NFKB1P19838 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.48■□□□□ 0.55
NFKB1P19838 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.48■□□□□ 0.55
NFKB1P19838 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.48■□□□□ 0.55
NFKB1P19838 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.48■□□□□ 0.55
NFKB1P19838 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NFKB1P19838 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NFKB1P19838 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NFKB1P19838 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NFKB1P19838 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.48■□□□□ 0.55
NFKB1P19838 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NFKB1P19838 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NFKB1P19838 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NFKB1P19838 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NFKB1P19838 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.48■□□□□ 0.55
NFKB1P19838 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.48■□□□□ 0.55
NFKB1P19838 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.47■□□□□ 0.55
NFKB1P19838 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKB1P19838 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKB1P19838 AC005332.8-201ENST00000622750 2735 ntBASIC18.47■□□□□ 0.55
NFKB1P19838 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
NFKB1P19838 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NFKB1P19838 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKB1P19838 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NFKB1P19838 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NFKB1P19838 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKB1P19838 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NFKB1P19838 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKB1P19838 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.47■□□□□ 0.55
NFKB1P19838 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKB1P19838 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.47■□□□□ 0.55
NFKB1P19838 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.47■□□□□ 0.55
NFKB1P19838 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NFKB1P19838 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.47■□□□□ 0.55
NFKB1P19838 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.47■□□□□ 0.55
NFKB1P19838 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.47■□□□□ 0.55
NFKB1P19838 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NFKB1P19838 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKB1P19838 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKB1P19838 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKB1P19838 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.47■□□□□ 0.55
NFKB1P19838 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NFKB1P19838 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
NFKB1P19838 AC067852.2-201ENST00000590513 2313 ntBASIC18.46■□□□□ 0.55
NFKB1P19838 BCL2-203ENST00000589955 5011 ntBASIC18.46■□□□□ 0.55
NFKB1P19838 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NFKB1P19838 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.46■□□□□ 0.55
NFKB1P19838 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.46■□□□□ 0.55
NFKB1P19838 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NFKB1P19838 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NFKB1P19838 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NFKB1P19838 STARP1-201ENST00000397973 869 ntBASIC18.46■□□□□ 0.55
NFKB1P19838 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NFKB1P19838 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
NFKB1P19838 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.46■□□□□ 0.55
NFKB1P19838 AL136038.4-201ENST00000603606 1261 ntBASIC18.46■□□□□ 0.55
NFKB1P19838 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.46■□□□□ 0.55
NFKB1P19838 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NFKB1P19838 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NFKB1P19838 AC132938.6-201ENST00000623828 1655 ntBASIC18.46■□□□□ 0.55
NFKB1P19838 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NFKB1P19838 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NFKB1P19838 AL391807.1-203ENST00000604392 2365 ntBASIC18.46■□□□□ 0.55
NFKB1P19838 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.46■□□□□ 0.55
NFKB1P19838 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NFKB1P19838 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
NFKB1P19838 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
NFKB1P19838 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.46■□□□□ 0.54
NFKB1P19838 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
NFKB1P19838 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NFKB1P19838 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
NFKB1P19838 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.45■□□□□ 0.54
NFKB1P19838 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NFKB1P19838 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.45■□□□□ 0.54
NFKB1P19838 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 AK4P3-201ENST00000418260 669 ntBASIC18.45■□□□□ 0.54
NFKB1P19838 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 KRT18P38-201ENST00000449496 1282 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms