Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 AL645608.8-201ENST00000606034 2086 ntBASIC18.69■□□□□ 0.58
BRAFP15056 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.69■□□□□ 0.58
BRAFP15056 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
BRAFP15056 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.69■□□□□ 0.58
BRAFP15056 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.69■□□□□ 0.58
BRAFP15056 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BRAFP15056 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRAFP15056 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.69■□□□□ 0.58
BRAFP15056 EGLN1P1-201ENST00000531623 762 ntBASIC18.69■□□□□ 0.58
BRAFP15056 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.69■□□□□ 0.58
BRAFP15056 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.69■□□□□ 0.58
BRAFP15056 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
BRAFP15056 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
BRAFP15056 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
BRAFP15056 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BRAFP15056 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BRAFP15056 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRAFP15056 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.69■□□□□ 0.58
BRAFP15056 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRAFP15056 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
BRAFP15056 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRAFP15056 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRAFP15056 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRAFP15056 KRT8P45-201ENST00000414328 1447 ntBASIC18.68■□□□□ 0.58
BRAFP15056 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.68■□□□□ 0.58
BRAFP15056 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
BRAFP15056 AC008556.1-201ENST00000610908 2040 ntBASIC18.68■□□□□ 0.58
BRAFP15056 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRAFP15056 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRAFP15056 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRAFP15056 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRAFP15056 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRAFP15056 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRAFP15056 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRAFP15056 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.68■□□□□ 0.58
BRAFP15056 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
BRAFP15056 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BRAFP15056 KRT8P32-201ENST00000512863 1461 ntBASIC18.68■□□□□ 0.58
BRAFP15056 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRAFP15056 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRAFP15056 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
BRAFP15056 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
BRAFP15056 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
BRAFP15056 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRAFP15056 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRAFP15056 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.68■□□□□ 0.58
BRAFP15056 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.68■□□□□ 0.58
BRAFP15056 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.68■□□□□ 0.58
BRAFP15056 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 AL357033.4-201ENST00000617703 1807 ntBASIC18.67■□□□□ 0.58
BRAFP15056 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
BRAFP15056 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.67■□□□□ 0.58
BRAFP15056 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.67■□□□□ 0.58
BRAFP15056 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.67■□□□□ 0.58
BRAFP15056 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BRAFP15056 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.67■□□□□ 0.58
BRAFP15056 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BRAFP15056 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BRAFP15056 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.67■□□□□ 0.58
BRAFP15056 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.67■□□□□ 0.58
BRAFP15056 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.67■□□□□ 0.58
BRAFP15056 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.67■□□□□ 0.58
BRAFP15056 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.67■□□□□ 0.58
BRAFP15056 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
BRAFP15056 KRT18P22-201ENST00000402024 1347 ntBASIC18.67■□□□□ 0.58
BRAFP15056 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.67■□□□□ 0.58
BRAFP15056 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
BRAFP15056 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.67■□□□□ 0.58
BRAFP15056 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAFP15056 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRAFP15056 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRAFP15056 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.66■□□□□ 0.58
BRAFP15056 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.66■□□□□ 0.58
BRAFP15056 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRAFP15056 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.66■□□□□ 0.58
BRAFP15056 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
BRAFP15056 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRAFP15056 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRAFP15056 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRAFP15056 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.66■□□□□ 0.58
BRAFP15056 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.66■□□□□ 0.58
BRAFP15056 RCN1P1-201ENST00000400413 996 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms