Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RARBP10826 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
RARBP10826 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.29■□□□□ 0.84
RARBP10826 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARBP10826 AC093484.2-201ENST00000580996 2166 ntBASIC20.28■□□□□ 0.84
RARBP10826 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RARBP10826 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARBP10826 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.28■□□□□ 0.84
RARBP10826 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RARBP10826 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARBP10826 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARBP10826 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.28■□□□□ 0.84
RARBP10826 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.28■□□□□ 0.84
RARBP10826 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.28■□□□□ 0.84
RARBP10826 AC034105.1-201ENST00000563488 319 ntBASIC20.28■□□□□ 0.84
RARBP10826 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.28■□□□□ 0.84
RARBP10826 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.28■□□□□ 0.84
RARBP10826 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RARBP10826 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARBP10826 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARBP10826 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARBP10826 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
RARBP10826 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.28■□□□□ 0.84
RARBP10826 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
RARBP10826 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARBP10826 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RARBP10826 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARBP10826 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARBP10826 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.27■□□□□ 0.84
RARBP10826 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARBP10826 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARBP10826 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARBP10826 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.27■□□□□ 0.84
RARBP10826 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.27■□□□□ 0.84
RARBP10826 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARBP10826 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.27■□□□□ 0.84
RARBP10826 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RARBP10826 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARBP10826 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RARBP10826 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RARBP10826 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARBP10826 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RARBP10826 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARBP10826 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RARBP10826 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.27■□□□□ 0.84
RARBP10826 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
RARBP10826 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.27■□□□□ 0.84
RARBP10826 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
RARBP10826 Z83851.2-201ENST00000609564 659 ntBASIC20.27■□□□□ 0.84
RARBP10826 AL139288.1-201ENST00000623748 933 ntBASIC20.27■□□□□ 0.84
RARBP10826 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
RARBP10826 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
RARBP10826 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RARBP10826 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RARBP10826 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RARBP10826 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.27■□□□□ 0.83
RARBP10826 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RARBP10826 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.26■□□□□ 0.83
RARBP10826 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.26■□□□□ 0.83
RARBP10826 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARBP10826 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARBP10826 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.26■□□□□ 0.83
RARBP10826 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RARBP10826 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARBP10826 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.26■□□□□ 0.83
RARBP10826 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RARBP10826 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARBP10826 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.26■□□□□ 0.83
RARBP10826 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.26■□□□□ 0.83
RARBP10826 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RARBP10826 UPF3AP3-201ENST00000420996 769 ntBASIC20.26■□□□□ 0.83
RARBP10826 RNA5SP415-201ENST00000517246 115 ntBASIC20.26■□□□□ 0.83
RARBP10826 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.26■□□□□ 0.83
RARBP10826 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.26■□□□□ 0.83
RARBP10826 AC012640.2-201ENST00000561606 901 ntBASIC20.26■□□□□ 0.83
RARBP10826 AC025062.2-201ENST00000605477 670 ntBASIC20.26■□□□□ 0.83
RARBP10826 AC055717.3-201ENST00000622967 595 ntBASIC20.26■□□□□ 0.83
RARBP10826 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARBP10826 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RARBP10826 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARBP10826 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.26■□□□□ 0.83
RARBP10826 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARBP10826 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARBP10826 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARBP10826 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARBP10826 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RARBP10826 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARBP10826 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARBP10826 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARBP10826 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARBP10826 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
RARBP10826 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARBP10826 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARBP10826 KRT18P65-201ENST00000439811 1286 ntBASIC20.25■□□□□ 0.83
RARBP10826 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.25■□□□□ 0.83
RARBP10826 KRT18P3-201ENST00000451602 1288 ntBASIC20.25■□□□□ 0.83
RARBP10826 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RARBP10826 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.25■□□□□ 0.83
RARBP10826 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.25■□□□□ 0.83
RARBP10826 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms