Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL1P09341 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CXCL1P09341 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL1P09341 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
CXCL1P09341 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL1P09341 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
CXCL1P09341 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 KRT17P1-201ENST00000399211 1546 ntBASIC14.1□□□□□ -0.15
CXCL1P09341 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.1□□□□□ -0.15
CXCL1P09341 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CXCL1P09341 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.1□□□□□ -0.15
CXCL1P09341 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.1□□□□□ -0.15
CXCL1P09341 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.1□□□□□ -0.15
CXCL1P09341 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CXCL1P09341 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.1□□□□□ -0.15
CXCL1P09341 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 YBX1P10-201ENST00000444752 975 ntBASIC14.1□□□□□ -0.15
CXCL1P09341 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
CXCL1P09341 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.1□□□□□ -0.15
CXCL1P09341 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
CXCL1P09341 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.1□□□□□ -0.15
CXCL1P09341 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CXCL1P09341 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL1P09341 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.1□□□□□ -0.15
CXCL1P09341 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CXCL1P09341 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.09□□□□□ -0.15
CXCL1P09341 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CXCL1P09341 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.09□□□□□ -0.15
CXCL1P09341 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.09□□□□□ -0.15
CXCL1P09341 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.09□□□□□ -0.15
CXCL1P09341 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 AC016769.1-201ENST00000409132 1010 ntBASIC14.09□□□□□ -0.15
CXCL1P09341 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.09□□□□□ -0.15
CXCL1P09341 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.09□□□□□ -0.15
CXCL1P09341 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCL1P09341 RAP2CP1-201ENST00000605103 478 ntBASIC14.09□□□□□ -0.15
CXCL1P09341 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCL1P09341 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCL1P09341 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CXCL1P09341 AC007950.2-201ENST00000615045 2347 ntBASIC14.09□□□□□ -0.15
CXCL1P09341 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CXCL1P09341 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CXCL1P09341 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 FER1L4-210ENST00000615531 5998 ntBASIC14.09□□□□□ -0.15
CXCL1P09341 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCL1P09341 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL1P09341 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
CXCL1P09341 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CXCL1P09341 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CXCL1P09341 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.08□□□□□ -0.15
CXCL1P09341 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CXCL1P09341 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CXCL1P09341 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CXCL1P09341 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCL1P09341 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCL1P09341 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CXCL1P09341 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL1P09341 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL1P09341 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms