Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD48P09326 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.83■□□□□ 0.6
CD48P09326 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
CD48P09326 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD48P09326 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.83■□□□□ 0.6
CD48P09326 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD48P09326 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.83■□□□□ 0.6
CD48P09326 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD48P09326 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.82■□□□□ 0.6
CD48P09326 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.82■□□□□ 0.6
CD48P09326 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.82■□□□□ 0.6
CD48P09326 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD48P09326 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.82■□□□□ 0.6
CD48P09326 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.82■□□□□ 0.6
CD48P09326 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CD48P09326 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD48P09326 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.82■□□□□ 0.6
CD48P09326 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD48P09326 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD48P09326 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.82■□□□□ 0.6
CD48P09326 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD48P09326 AC117947.1-201ENST00000427448 529 ntBASIC18.82■□□□□ 0.6
CD48P09326 RASA4DP-201ENST00000460726 1199 ntBASIC18.82■□□□□ 0.6
CD48P09326 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CD48P09326 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD48P09326 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.82■□□□□ 0.6
CD48P09326 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CD48P09326 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CD48P09326 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD48P09326 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD48P09326 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CD48P09326 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CD48P09326 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CD48P09326 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CD48P09326 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CD48P09326 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CD48P09326 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD48P09326 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CD48P09326 FZD10-202ENST00000539839 3282 ntBASIC18.82■□□□□ 0.6
CD48P09326 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CD48P09326 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.81■□□□□ 0.6
CD48P09326 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CD48P09326 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 YBX1P2-201ENST00000489612 999 ntBASIC18.81■□□□□ 0.6
CD48P09326 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.81■□□□□ 0.6
CD48P09326 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.81■□□□□ 0.6
CD48P09326 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.81■□□□□ 0.6
CD48P09326 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CD48P09326 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.81■□□□□ 0.6
CD48P09326 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CD48P09326 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CD48P09326 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD48P09326 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD48P09326 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CD48P09326 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD48P09326 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CD48P09326 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD48P09326 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD48P09326 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.8■□□□□ 0.6
CD48P09326 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.8■□□□□ 0.6
CD48P09326 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.8■□□□□ 0.6
CD48P09326 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD48P09326 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.8■□□□□ 0.6
CD48P09326 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CD48P09326 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CD48P09326 AC006011.2-201ENST00000621313 1158 ntBASIC18.8■□□□□ 0.6
CD48P09326 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD48P09326 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD48P09326 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD48P09326 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CD48P09326 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD48P09326 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD48P09326 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD48P09326 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.8■□□□□ 0.6
CD48P09326 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.8■□□□□ 0.6
CD48P09326 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD48P09326 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.8■□□□□ 0.6
CD48P09326 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CD48P09326 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD48P09326 AC100803.2-201ENST00000562459 1963 ntBASIC18.79■□□□□ 0.6
CD48P09326 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD48P09326 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD48P09326 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD48P09326 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD48P09326 AC020916.1-201ENST00000587762 1774 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms