Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
COL1A2P08123 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A2P08123 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A2P08123 HLA-A-201ENST00000376802 1334 ntBASIC19.84■□□□□ 0.77
COL1A2P08123 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
COL1A2P08123 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL1A2P08123 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.83■□□□□ 0.77
COL1A2P08123 ABCD1P5-201ENST00000445663 754 ntBASIC19.83■□□□□ 0.77
COL1A2P08123 FAM197Y8-203ENST00000450145 560 ntBASIC19.83■□□□□ 0.77
COL1A2P08123 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.83■□□□□ 0.77
COL1A2P08123 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.83■□□□□ 0.77
COL1A2P08123 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
COL1A2P08123 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL1A2P08123 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
COL1A2P08123 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.83■□□□□ 0.77
COL1A2P08123 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL1A2P08123 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
COL1A2P08123 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL1A2P08123 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
COL1A2P08123 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
COL1A2P08123 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
COL1A2P08123 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL1A2P08123 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL1A2P08123 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL1A2P08123 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.83■□□□□ 0.76
COL1A2P08123 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.83■□□□□ 0.76
COL1A2P08123 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.83■□□□□ 0.76
COL1A2P08123 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.83■□□□□ 0.76
COL1A2P08123 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL1A2P08123 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL1A2P08123 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL1A2P08123 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
COL1A2P08123 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL1A2P08123 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL1A2P08123 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.83■□□□□ 0.76
COL1A2P08123 FAM220CP-201ENST00000395253 831 ntBASIC19.83■□□□□ 0.76
COL1A2P08123 AC007967.3-201ENST00000434308 558 ntBASIC19.83■□□□□ 0.76
COL1A2P08123 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
COL1A2P08123 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.83■□□□□ 0.76
COL1A2P08123 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
COL1A2P08123 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
COL1A2P08123 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.83■□□□□ 0.76
COL1A2P08123 AL773604.1-201ENST00000617417 272 ntBASIC19.83■□□□□ 0.76
COL1A2P08123 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A2P08123 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A2P08123 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A2P08123 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A2P08123 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.82■□□□□ 0.76
COL1A2P08123 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A2P08123 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A2P08123 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A2P08123 KRT8P47-201ENST00000604727 1398 ntBASIC19.82■□□□□ 0.76
COL1A2P08123 AIRN-201ENST00000601203 4374 ntBASIC19.82■□□□□ 0.76
COL1A2P08123 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A2P08123 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.82■□□□□ 0.76
COL1A2P08123 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A2P08123 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A2P08123 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A2P08123 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A2P08123 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.82■□□□□ 0.76
COL1A2P08123 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.82■□□□□ 0.76
COL1A2P08123 AF186996.4-201ENST00000467186 377 ntBASIC19.82■□□□□ 0.76
COL1A2P08123 RNA5SP419-201ENST00000515908 135 ntBASIC19.82■□□□□ 0.76
COL1A2P08123 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.82■□□□□ 0.76
COL1A2P08123 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
COL1A2P08123 MTDHP3-201ENST00000594186 672 ntBASIC19.82■□□□□ 0.76
COL1A2P08123 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.82■□□□□ 0.76
COL1A2P08123 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.82■□□□□ 0.76
COL1A2P08123 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A2P08123 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.82■□□□□ 0.76
COL1A2P08123 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A2P08123 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A2P08123 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A2P08123 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A2P08123 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.81■□□□□ 0.76
COL1A2P08123 AP005117.1-201ENST00000584346 1413 ntBASIC19.81■□□□□ 0.76
COL1A2P08123 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A2P08123 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
COL1A2P08123 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.81■□□□□ 0.76
COL1A2P08123 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A2P08123 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A2P08123 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.81■□□□□ 0.76
COL1A2P08123 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.81■□□□□ 0.76
COL1A2P08123 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A2P08123 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A2P08123 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A2P08123 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A2P08123 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.81■□□□□ 0.76
COL1A2P08123 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A2P08123 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.81■□□□□ 0.76
COL1A2P08123 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A2P08123 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A2P08123 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A2P08123 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.81■□□□□ 0.76
COL1A2P08123 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.81■□□□□ 0.76
COL1A2P08123 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A2P08123 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.81■□□□□ 0.76
COL1A2P08123 SCARNA2-201ENST00000458748 420 ntBASIC19.81■□□□□ 0.76
COL1A2P08123 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.81■□□□□ 0.76
COL1A2P08123 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms