Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM3P06753 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.39■□□□□ 0.85
TPM3P06753 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM3P06753 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TPM3P06753 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM3P06753 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM3P06753 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.39■□□□□ 0.85
TPM3P06753 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.39■□□□□ 0.85
TPM3P06753 KRT16P5-201ENST00000455284 522 ntBASIC20.39■□□□□ 0.85
TPM3P06753 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.39■□□□□ 0.85
TPM3P06753 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TPM3P06753 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TPM3P06753 KRT18P41-201ENST00000518924 1277 ntBASIC20.39■□□□□ 0.85
TPM3P06753 UNC93B5-201ENST00000530315 699 ntBASIC20.39■□□□□ 0.85
TPM3P06753 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM3P06753 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.39■□□□□ 0.85
TPM3P06753 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.39■□□□□ 0.85
TPM3P06753 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.39■□□□□ 0.85
TPM3P06753 LINC00602-201ENST00000629776 2065 ntBASIC20.39■□□□□ 0.85
TPM3P06753 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TPM3P06753 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.39■□□□□ 0.85
TPM3P06753 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TPM3P06753 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM3P06753 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM3P06753 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPM3P06753 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPM3P06753 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM3P06753 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM3P06753 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TPM3P06753 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPM3P06753 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM3P06753 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM3P06753 KRT17P3-201ENST00000420566 1262 ntBASIC20.38■□□□□ 0.85
TPM3P06753 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM3P06753 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPM3P06753 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.38■□□□□ 0.85
TPM3P06753 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM3P06753 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.38■□□□□ 0.85
TPM3P06753 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM3P06753 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TPM3P06753 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM3P06753 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPM3P06753 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM3P06753 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPM3P06753 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
TPM3P06753 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TPM3P06753 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM3P06753 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM3P06753 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TPM3P06753 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.38■□□□□ 0.85
TPM3P06753 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.38■□□□□ 0.85
TPM3P06753 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TPM3P06753 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM3P06753 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM3P06753 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM3P06753 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
TPM3P06753 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM3P06753 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM3P06753 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM3P06753 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM3P06753 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM3P06753 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.37■□□□□ 0.85
TPM3P06753 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM3P06753 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM3P06753 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM3P06753 MTDHP1-201ENST00000605323 784 ntBASIC20.37■□□□□ 0.85
TPM3P06753 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM3P06753 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
TPM3P06753 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TPM3P06753 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM3P06753 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM3P06753 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM3P06753 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM3P06753 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM3P06753 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM3P06753 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.36■□□□□ 0.85
TPM3P06753 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.36■□□□□ 0.85
TPM3P06753 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.36■□□□□ 0.85
TPM3P06753 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TPM3P06753 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TPM3P06753 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TPM3P06753 AP000593.1-201ENST00000393668 712 ntBASIC20.36■□□□□ 0.85
TPM3P06753 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM3P06753 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms