Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA1P02708 AC139530.3-201ENST00000620344 690 ntBASIC19.69■□□□□ 0.74
CHRNA1P02708 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA1P02708 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CHRNA1P02708 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.69■□□□□ 0.74
CHRNA1P02708 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CHRNA1P02708 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA1P02708 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA1P02708 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA1P02708 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA1P02708 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CHRNA1P02708 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.68■□□□□ 0.74
CHRNA1P02708 AL356309.3-201ENST00000624132 1934 ntBASIC19.68■□□□□ 0.74
CHRNA1P02708 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA1P02708 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.68■□□□□ 0.74
CHRNA1P02708 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA1P02708 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA1P02708 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CHRNA1P02708 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CHRNA1P02708 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA1P02708 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA1P02708 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA1P02708 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.68■□□□□ 0.74
CHRNA1P02708 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA1P02708 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.68■□□□□ 0.74
CHRNA1P02708 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.68■□□□□ 0.74
CHRNA1P02708 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.68■□□□□ 0.74
CHRNA1P02708 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.68■□□□□ 0.74
CHRNA1P02708 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.68■□□□□ 0.74
CHRNA1P02708 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.68■□□□□ 0.74
CHRNA1P02708 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA1P02708 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA1P02708 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA1P02708 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CHRNA1P02708 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CHRNA1P02708 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.68■□□□□ 0.74
CHRNA1P02708 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA1P02708 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA1P02708 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA1P02708 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.68■□□□□ 0.74
CHRNA1P02708 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA1P02708 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.67■□□□□ 0.74
CHRNA1P02708 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNA1P02708 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA1P02708 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA1P02708 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNA1P02708 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNA1P02708 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA1P02708 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA1P02708 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNA1P02708 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CHRNA1P02708 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.67■□□□□ 0.74
CHRNA1P02708 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.67■□□□□ 0.74
CHRNA1P02708 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CHRNA1P02708 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CHRNA1P02708 IGHV3-22-201ENST00000520721 359 ntBASIC19.67■□□□□ 0.74
CHRNA1P02708 AC012640.2-201ENST00000561606 901 ntBASIC19.67■□□□□ 0.74
CHRNA1P02708 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNA1P02708 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.67■□□□□ 0.74
CHRNA1P02708 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.67■□□□□ 0.74
CHRNA1P02708 ESPNP-201ENST00000270691 2015 ntBASIC19.67■□□□□ 0.74
CHRNA1P02708 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA1P02708 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CHRNA1P02708 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNA1P02708 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA1P02708 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA1P02708 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNA1P02708 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNA1P02708 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CHRNA1P02708 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.66■□□□□ 0.74
CHRNA1P02708 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.66■□□□□ 0.74
CHRNA1P02708 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.66■□□□□ 0.74
CHRNA1P02708 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.66■□□□□ 0.74
CHRNA1P02708 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CHRNA1P02708 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA1P02708 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.66■□□□□ 0.74
CHRNA1P02708 KRT18P13-201ENST00000400056 1290 ntBASIC19.66■□□□□ 0.74
CHRNA1P02708 MIR940-201ENST00000401276 94 ntBASIC19.66■□□□□ 0.74
CHRNA1P02708 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.66■□□□□ 0.74
CHRNA1P02708 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.66■□□□□ 0.74
CHRNA1P02708 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA1P02708 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA1P02708 AC025062.2-201ENST00000605477 670 ntBASIC19.66■□□□□ 0.74
CHRNA1P02708 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA1P02708 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA1P02708 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA1P02708 AC126763.1-201ENST00000552015 2118 ntBASIC19.66■□□□□ 0.74
CHRNA1P02708 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA1P02708 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA1P02708 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRNA1P02708 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA1P02708 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA1P02708 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA1P02708 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA1P02708 AL031598.1-201ENST00000561511 1773 ntBASIC19.65■□□□□ 0.74
CHRNA1P02708 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA1P02708 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA1P02708 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.65■□□□□ 0.74
CHRNA1P02708 AC007967.3-201ENST00000434308 558 ntBASIC19.65■□□□□ 0.74
CHRNA1P02708 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms