Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ELK2BP-201ENST00000415014 1224 ntBASIC18.17■□□□□ 0.5
PDGFBP01127 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.17■□□□□ 0.5
PDGFBP01127 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.17■□□□□ 0.5
PDGFBP01127 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFBP01127 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.17■□□□□ 0.5
PDGFBP01127 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PDGFBP01127 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.17■□□□□ 0.5
PDGFBP01127 AF228730.6-201ENST00000641497 218 ntBASIC18.17■□□□□ 0.5
PDGFBP01127 AC084121.3-201ENST00000641716 218 ntBASIC18.17■□□□□ 0.5
PDGFBP01127 AC105233.6-201ENST00000642093 218 ntBASIC18.17■□□□□ 0.5
PDGFBP01127 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFBP01127 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFBP01127 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFBP01127 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFBP01127 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFBP01127 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFBP01127 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.17■□□□□ 0.5
PDGFBP01127 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFBP01127 AC006504.4-201ENST00000592118 1568 ntBASIC18.17■□□□□ 0.5
PDGFBP01127 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFBP01127 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.17■□□□□ 0.5
PDGFBP01127 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.16■□□□□ 0.5
PDGFBP01127 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.16■□□□□ 0.5
PDGFBP01127 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PDGFBP01127 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.16■□□□□ 0.5
PDGFBP01127 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.16■□□□□ 0.5
PDGFBP01127 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.16■□□□□ 0.5
PDGFBP01127 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PDGFBP01127 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.16■□□□□ 0.5
PDGFBP01127 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 AC112698.1-201ENST00000510299 916 ntBASIC18.16■□□□□ 0.5
PDGFBP01127 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.16■□□□□ 0.5
PDGFBP01127 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.16■□□□□ 0.5
PDGFBP01127 AC073592.4-201ENST00000623827 446 ntBASIC18.16■□□□□ 0.5
PDGFBP01127 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
PDGFBP01127 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.16■□□□□ 0.5
PDGFBP01127 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.16■□□□□ 0.5
PDGFBP01127 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDGFBP01127 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFBP01127 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFBP01127 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFBP01127 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFBP01127 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.15■□□□□ 0.5
PDGFBP01127 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PDGFBP01127 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFBP01127 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFBP01127 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.15■□□□□ 0.5
PDGFBP01127 AC007967.3-201ENST00000434308 558 ntBASIC18.15■□□□□ 0.5
PDGFBP01127 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.15■□□□□ 0.5
PDGFBP01127 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFBP01127 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.15■□□□□ 0.5
PDGFBP01127 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.15■□□□□ 0.5
PDGFBP01127 AC069262.1-201ENST00000539058 672 ntBASIC18.15■□□□□ 0.5
PDGFBP01127 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.15■□□□□ 0.5
PDGFBP01127 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.15■□□□□ 0.5
PDGFBP01127 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.15■□□□□ 0.5
PDGFBP01127 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFBP01127 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFBP01127 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFBP01127 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFBP01127 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFBP01127 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFBP01127 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PDGFBP01127 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDGFBP01127 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDGFBP01127 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
PDGFBP01127 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PDGFBP01127 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
PDGFBP01127 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PDGFBP01127 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDGFBP01127 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PDGFBP01127 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.14■□□□□ 0.5
PDGFBP01127 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
PDGFBP01127 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
PDGFBP01127 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFBP01127 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.14■□□□□ 0.49
PDGFBP01127 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFBP01127 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFBP01127 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFBP01127 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
PDGFBP01127 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.14■□□□□ 0.49
PDGFBP01127 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFBP01127 KRT18P65-201ENST00000439811 1286 ntBASIC18.14■□□□□ 0.49
PDGFBP01127 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PDGFBP01127 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms