Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.61■□□□□ 0.57
MT-CO1P00395 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-CO1P00395 AC005332.8-201ENST00000622750 2735 ntBASIC18.6■□□□□ 0.57
MT-CO1P00395 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MT-CO1P00395 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-CO1P00395 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-CO1P00395 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MT-CO1P00395 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.6■□□□□ 0.57
MT-CO1P00395 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.6■□□□□ 0.57
MT-CO1P00395 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
MT-CO1P00395 IGHGP-201ENST00000390555 1178 ntBASIC18.6■□□□□ 0.57
MT-CO1P00395 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-CO1P00395 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.6■□□□□ 0.57
MT-CO1P00395 KRT8P26-201ENST00000534154 1276 ntBASIC18.6■□□□□ 0.57
MT-CO1P00395 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.6■□□□□ 0.57
MT-CO1P00395 AL390719.2-201ENST00000606993 987 ntBASIC18.6■□□□□ 0.57
MT-CO1P00395 AL121672.3-201ENST00000608644 468 ntBASIC18.6■□□□□ 0.57
MT-CO1P00395 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.6■□□□□ 0.57
MT-CO1P00395 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.6■□□□□ 0.57
MT-CO1P00395 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-CO1P00395 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.6■□□□□ 0.57
MT-CO1P00395 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.6■□□□□ 0.57
MT-CO1P00395 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.6■□□□□ 0.57
MT-CO1P00395 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-CO1P00395 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-CO1P00395 LINC01126-201ENST00000623515 1646 ntBASIC18.6■□□□□ 0.57
MT-CO1P00395 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
MT-CO1P00395 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
MT-CO1P00395 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
MT-CO1P00395 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
MT-CO1P00395 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-CO1P00395 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-CO1P00395 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-CO1P00395 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
MT-CO1P00395 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.59■□□□□ 0.57
MT-CO1P00395 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.59■□□□□ 0.57
MT-CO1P00395 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-CO1P00395 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-CO1P00395 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-CO1P00395 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.59■□□□□ 0.57
MT-CO1P00395 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.59■□□□□ 0.57
MT-CO1P00395 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
MT-CO1P00395 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.59■□□□□ 0.57
MT-CO1P00395 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.59■□□□□ 0.57
MT-CO1P00395 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.59■□□□□ 0.57
MT-CO1P00395 AP002383.4-201ENST00000442518 975 ntBASIC18.59■□□□□ 0.57
MT-CO1P00395 TSSC2-201ENST00000450217 709 ntBASIC18.59■□□□□ 0.57
MT-CO1P00395 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.59■□□□□ 0.57
MT-CO1P00395 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.59■□□□□ 0.57
MT-CO1P00395 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.59■□□□□ 0.57
MT-CO1P00395 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-CO1P00395 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.59■□□□□ 0.57
MT-CO1P00395 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-CO1P00395 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-CO1P00395 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-CO1P00395 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-CO1P00395 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
MT-CO1P00395 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MT-CO1P00395 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-CO1P00395 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-CO1P00395 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-CO1P00395 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MT-CO1P00395 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.59■□□□□ 0.57
MT-CO1P00395 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
MT-CO1P00395 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
MT-CO1P00395 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.58■□□□□ 0.57
MT-CO1P00395 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
MT-CO1P00395 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MT-CO1P00395 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MT-CO1P00395 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
MT-CO1P00395 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.58■□□□□ 0.57
MT-CO1P00395 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.58■□□□□ 0.57
MT-CO1P00395 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.58■□□□□ 0.57
MT-CO1P00395 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MT-CO1P00395 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MT-CO1P00395 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MT-CO1P00395 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MT-CO1P00395 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MT-CO1P00395 ATP5G2P1-201ENST00000433580 426 ntBASIC18.58■□□□□ 0.56
MT-CO1P00395 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.58■□□□□ 0.56
MT-CO1P00395 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.58■□□□□ 0.56
MT-CO1P00395 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.58■□□□□ 0.56
MT-CO1P00395 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.58■□□□□ 0.56
MT-CO1P00395 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.58■□□□□ 0.56
MT-CO1P00395 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
MT-CO1P00395 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.58■□□□□ 0.56
MT-CO1P00395 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.58■□□□□ 0.56
MT-CO1P00395 AC092119.3-201ENST00000612618 583 ntBASIC18.58■□□□□ 0.56
MT-CO1P00395 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MT-CO1P00395 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MT-CO1P00395 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.58■□□□□ 0.56
MT-CO1P00395 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MT-CO1P00395 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
MT-CO1P00395 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MT-CO1P00395 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.57■□□□□ 0.56
MT-CO1P00395 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MT-CO1P00395 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MT-CO1P00395 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
MT-CO1P00395 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
MT-CO1P00395 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms