Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
RTN3O95197 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.11■□□□□ 0.65
RTN3O95197 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.11■□□□□ 0.65
RTN3O95197 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.11■□□□□ 0.65
RTN3O95197 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.11■□□□□ 0.65
RTN3O95197 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.11■□□□□ 0.65
RTN3O95197 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 AL592071.1-201ENST00000611956 408 ntBASIC19.11■□□□□ 0.65
RTN3O95197 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.11■□□□□ 0.65
RTN3O95197 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RTN3O95197 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.11■□□□□ 0.65
RTN3O95197 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.11■□□□□ 0.65
RTN3O95197 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RTN3O95197 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.11■□□□□ 0.65
RTN3O95197 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
RTN3O95197 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTN3O95197 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.11■□□□□ 0.65
RTN3O95197 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
RTN3O95197 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.1■□□□□ 0.65
RTN3O95197 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
RTN3O95197 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 PCDHB18P-201ENST00000524813 2368 ntBASIC19.1■□□□□ 0.65
RTN3O95197 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.1■□□□□ 0.65
RTN3O95197 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.1■□□□□ 0.65
RTN3O95197 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.1■□□□□ 0.65
RTN3O95197 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.1■□□□□ 0.65
RTN3O95197 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RTN3O95197 LINC00265-3P-201ENST00000447588 903 ntBASIC19.1■□□□□ 0.65
RTN3O95197 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.1■□□□□ 0.65
RTN3O95197 RN7SL606P-201ENST00000472779 293 ntBASIC19.1■□□□□ 0.65
RTN3O95197 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.1■□□□□ 0.65
RTN3O95197 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 AC124864.1-201ENST00000623408 392 ntBASIC19.1■□□□□ 0.65
RTN3O95197 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
RTN3O95197 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTN3O95197 GMCL1P1-201ENST00000463439 1581 ntBASIC19.1■□□□□ 0.65
RTN3O95197 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN3O95197 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN3O95197 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN3O95197 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN3O95197 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN3O95197 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN3O95197 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTN3O95197 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.09■□□□□ 0.65
RTN3O95197 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN3O95197 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN3O95197 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN3O95197 TOB2P1-201ENST00000469761 992 ntBASIC19.09■□□□□ 0.65
RTN3O95197 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTN3O95197 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN3O95197 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN3O95197 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.09■□□□□ 0.65
RTN3O95197 LINC01126-201ENST00000623515 1646 ntBASIC19.09■□□□□ 0.65
RTN3O95197 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN3O95197 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN3O95197 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTN3O95197 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN3O95197 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RTN3O95197 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTN3O95197 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RTN3O95197 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RTN3O95197 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.09■□□□□ 0.65
RTN3O95197 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
RTN3O95197 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTN3O95197 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
RTN3O95197 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN3O95197 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN3O95197 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN3O95197 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.08■□□□□ 0.64
RTN3O95197 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.08■□□□□ 0.64
RTN3O95197 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.08■□□□□ 0.64
RTN3O95197 VENTXP7-201ENST00000475503 772 ntBASIC19.08■□□□□ 0.64
RTN3O95197 AC126763.1-201ENST00000552015 2118 ntBASIC19.08■□□□□ 0.64
RTN3O95197 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.08■□□□□ 0.64
RTN3O95197 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.08■□□□□ 0.64
RTN3O95197 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN3O95197 AC073592.3-201ENST00000625118 1834 ntBASIC19.08■□□□□ 0.64
RTN3O95197 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms