Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.44■□□□□ 0.38
CPNE3O75131 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CPNE3O75131 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.44■□□□□ 0.38
CPNE3O75131 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE3O75131 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.44■□□□□ 0.38
CPNE3O75131 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CPNE3O75131 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE3O75131 LINC00265-3P-201ENST00000447588 903 ntBASIC17.44■□□□□ 0.38
CPNE3O75131 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.44■□□□□ 0.38
CPNE3O75131 TPSP2-201ENST00000561760 610 ntBASIC17.44■□□□□ 0.38
CPNE3O75131 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.44■□□□□ 0.38
CPNE3O75131 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CPNE3O75131 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.44■□□□□ 0.38
CPNE3O75131 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE3O75131 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE3O75131 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.44■□□□□ 0.38
CPNE3O75131 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CPNE3O75131 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.44■□□□□ 0.38
CPNE3O75131 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CPNE3O75131 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE3O75131 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CPNE3O75131 AL133373.2-201ENST00000623187 2828 ntBASIC17.43■□□□□ 0.38
CPNE3O75131 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CPNE3O75131 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 IGHGP-201ENST00000390555 1178 ntBASIC17.43■□□□□ 0.38
CPNE3O75131 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CPNE3O75131 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.43■□□□□ 0.38
CPNE3O75131 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE3O75131 AC111152.3-201ENST00000569699 673 ntBASIC17.43■□□□□ 0.38
CPNE3O75131 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.43■□□□□ 0.38
CPNE3O75131 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CPNE3O75131 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE3O75131 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CPNE3O75131 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CPNE3O75131 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE3O75131 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE3O75131 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE3O75131 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE3O75131 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.42■□□□□ 0.38
CPNE3O75131 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE3O75131 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE3O75131 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE3O75131 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.42■□□□□ 0.38
CPNE3O75131 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE3O75131 NOC2LP1-202ENST00000452600 2235 ntBASIC17.42■□□□□ 0.38
CPNE3O75131 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE3O75131 NUS1P1-201ENST00000446295 882 ntBASIC17.42■□□□□ 0.38
CPNE3O75131 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.42■□□□□ 0.38
CPNE3O75131 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.42■□□□□ 0.38
CPNE3O75131 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.42■□□□□ 0.38
CPNE3O75131 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CPNE3O75131 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.42■□□□□ 0.38
CPNE3O75131 IGHV3-41-201ENST00000613121 348 ntBASIC17.42■□□□□ 0.38
CPNE3O75131 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.42■□□□□ 0.38
CPNE3O75131 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CPNE3O75131 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE3O75131 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE3O75131 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE3O75131 KRT89P-201ENST00000620027 1478 ntBASIC17.42■□□□□ 0.38
CPNE3O75131 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE3O75131 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE3O75131 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE3O75131 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE3O75131 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE3O75131 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CPNE3O75131 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE3O75131 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms