Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.25■□□□□ 0.35
SCN2BO60939 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.25■□□□□ 0.35
SCN2BO60939 MIR3180-4-201ENST00000582223 153 ntBASIC17.25■□□□□ 0.35
SCN2BO60939 MIR4785-201ENST00000585005 73 ntBASIC17.25■□□□□ 0.35
SCN2BO60939 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCN2BO60939 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN2BO60939 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN2BO60939 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN2BO60939 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SCN2BO60939 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SCN2BO60939 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SCN2BO60939 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN2BO60939 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.25■□□□□ 0.35
SCN2BO60939 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.25■□□□□ 0.35
SCN2BO60939 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SCN2BO60939 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.25■□□□□ 0.35
SCN2BO60939 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SCN2BO60939 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN2BO60939 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.24■□□□□ 0.35
SCN2BO60939 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN2BO60939 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SCN2BO60939 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SCN2BO60939 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN2BO60939 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SCN2BO60939 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN2BO60939 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.24■□□□□ 0.35
SCN2BO60939 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SCN2BO60939 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCN2BO60939 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCN2BO60939 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.24■□□□□ 0.35
SCN2BO60939 CCR12P-201ENST00000446203 998 ntBASIC17.24■□□□□ 0.35
SCN2BO60939 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.24■□□□□ 0.35
SCN2BO60939 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCN2BO60939 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.24■□□□□ 0.35
SCN2BO60939 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCN2BO60939 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.24■□□□□ 0.35
SCN2BO60939 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.24■□□□□ 0.35
SCN2BO60939 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN2BO60939 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN2BO60939 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN2BO60939 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN2BO60939 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN2BO60939 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN2BO60939 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.24■□□□□ 0.35
SCN2BO60939 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN2BO60939 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN2BO60939 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SCN2BO60939 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.23■□□□□ 0.35
SCN2BO60939 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.23■□□□□ 0.35
SCN2BO60939 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 KRT18P55-202ENST00000578578 1546 ntBASIC17.23■□□□□ 0.35
SCN2BO60939 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 TSPY14P-201ENST00000303979 915 ntBASIC17.23■□□□□ 0.35
SCN2BO60939 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.23■□□□□ 0.35
SCN2BO60939 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.23■□□□□ 0.35
SCN2BO60939 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.23■□□□□ 0.35
SCN2BO60939 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.23■□□□□ 0.35
SCN2BO60939 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.23■□□□□ 0.35
SCN2BO60939 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
SCN2BO60939 AC010653.2-201ENST00000623505 997 ntBASIC17.23■□□□□ 0.35
SCN2BO60939 AC112497.1-201ENST00000624824 639 ntBASIC17.23■□□□□ 0.35
SCN2BO60939 AC116562.4-202ENST00000641738 218 ntBASIC17.23■□□□□ 0.35
SCN2BO60939 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.23■□□□□ 0.35
SCN2BO60939 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SCN2BO60939 LTB4R2-202ENST00000528054 3092 ntBASIC17.23■□□□□ 0.35
SCN2BO60939 AC012317.2-201ENST00000623305 2251 ntBASIC17.23■□□□□ 0.35
SCN2BO60939 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
SCN2BO60939 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SCN2BO60939 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SCN2BO60939 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCN2BO60939 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SCN2BO60939 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SCN2BO60939 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.22■□□□□ 0.35
SCN2BO60939 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms