Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF4O60810 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.48■□□□□ 0.39
PRAMEF4O60810 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF4O60810 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PRAMEF4O60810 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PRAMEF4O60810 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PRAMEF4O60810 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.47■□□□□ 0.39
PRAMEF4O60810 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.47■□□□□ 0.39
PRAMEF4O60810 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.47■□□□□ 0.39
PRAMEF4O60810 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.47■□□□□ 0.39
PRAMEF4O60810 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 RN7SL850P-201ENST00000579959 291 ntBASIC17.47■□□□□ 0.39
PRAMEF4O60810 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.47■□□□□ 0.39
PRAMEF4O60810 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PRAMEF4O60810 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
PRAMEF4O60810 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PRAMEF4O60810 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.47■□□□□ 0.39
PRAMEF4O60810 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PRAMEF4O60810 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
PRAMEF4O60810 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEF4O60810 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
PRAMEF4O60810 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.47■□□□□ 0.39
PRAMEF4O60810 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEF4O60810 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEF4O60810 AC100803.2-201ENST00000562459 1963 ntBASIC17.46■□□□□ 0.39
PRAMEF4O60810 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEF4O60810 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.46■□□□□ 0.39
PRAMEF4O60810 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEF4O60810 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEF4O60810 RNF152P1-201ENST00000397754 604 ntBASIC17.46■□□□□ 0.39
PRAMEF4O60810 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.46■□□□□ 0.39
PRAMEF4O60810 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.46■□□□□ 0.39
PRAMEF4O60810 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.46■□□□□ 0.39
PRAMEF4O60810 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.46■□□□□ 0.39
PRAMEF4O60810 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.46■□□□□ 0.39
PRAMEF4O60810 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.46■□□□□ 0.39
PRAMEF4O60810 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PRAMEF4O60810 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PRAMEF4O60810 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.46■□□□□ 0.39
PRAMEF4O60810 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEF4O60810 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PRAMEF4O60810 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.46■□□□□ 0.39
PRAMEF4O60810 AC012317.2-201ENST00000623305 2251 ntBASIC17.46■□□□□ 0.39
PRAMEF4O60810 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
PRAMEF4O60810 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEF4O60810 LINC00602-201ENST00000629776 2065 ntBASIC17.46■□□□□ 0.39
PRAMEF4O60810 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.46■□□□□ 0.39
PRAMEF4O60810 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.46■□□□□ 0.38
PRAMEF4O60810 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PRAMEF4O60810 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PRAMEF4O60810 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.46■□□□□ 0.38
PRAMEF4O60810 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PRAMEF4O60810 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PRAMEF4O60810 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.45■□□□□ 0.38
PRAMEF4O60810 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.45■□□□□ 0.38
PRAMEF4O60810 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.45■□□□□ 0.38
PRAMEF4O60810 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 LETM1P2-201ENST00000597330 2178 ntBASIC17.45■□□□□ 0.38
PRAMEF4O60810 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PRAMEF4O60810 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PRAMEF4O60810 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 AK4P3-201ENST00000418260 669 ntBASIC17.45■□□□□ 0.38
PRAMEF4O60810 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 DUTP2-201ENST00000519164 463 ntBASIC17.45■□□□□ 0.38
PRAMEF4O60810 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.45■□□□□ 0.38
PRAMEF4O60810 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.45■□□□□ 0.38
PRAMEF4O60810 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PRAMEF4O60810 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
PRAMEF4O60810 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.45■□□□□ 0.38
PRAMEF4O60810 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.45■□□□□ 0.38
PRAMEF4O60810 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms