Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.14■□□□□ 0.33
PLOD3O60568 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.14■□□□□ 0.33
PLOD3O60568 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.14■□□□□ 0.33
PLOD3O60568 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.14■□□□□ 0.33
PLOD3O60568 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PLOD3O60568 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PLOD3O60568 AC135776.1-201ENST00000319817 2481 ntBASIC17.13■□□□□ 0.33
PLOD3O60568 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PLOD3O60568 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PLOD3O60568 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PLOD3O60568 ESPNP-201ENST00000270691 2015 ntBASIC17.13■□□□□ 0.33
PLOD3O60568 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.13■□□□□ 0.33
PLOD3O60568 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PLOD3O60568 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.13■□□□□ 0.33
PLOD3O60568 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PLOD3O60568 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PLOD3O60568 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.13■□□□□ 0.33
PLOD3O60568 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PLOD3O60568 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PLOD3O60568 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PLOD3O60568 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PLOD3O60568 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.13■□□□□ 0.33
PLOD3O60568 COX11P1-201ENST00000489116 835 ntBASIC17.13■□□□□ 0.33
PLOD3O60568 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.13■□□□□ 0.33
PLOD3O60568 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PLOD3O60568 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.13■□□□□ 0.33
PLOD3O60568 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PLOD3O60568 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PLOD3O60568 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PLOD3O60568 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
PLOD3O60568 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PLOD3O60568 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PLOD3O60568 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.13■□□□□ 0.33
PLOD3O60568 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PLOD3O60568 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PLOD3O60568 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PLOD3O60568 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PLOD3O60568 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PLOD3O60568 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PLOD3O60568 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.12■□□□□ 0.33
PLOD3O60568 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.12■□□□□ 0.33
PLOD3O60568 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PLOD3O60568 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PLOD3O60568 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PLOD3O60568 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PLOD3O60568 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PLOD3O60568 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PLOD3O60568 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PLOD3O60568 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.12■□□□□ 0.33
PLOD3O60568 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PLOD3O60568 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PLOD3O60568 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PLOD3O60568 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PLOD3O60568 AC005521.1-201ENST00000393351 872 ntBASIC17.12■□□□□ 0.33
PLOD3O60568 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.12■□□□□ 0.33
PLOD3O60568 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
PLOD3O60568 GCSHP2-201ENST00000560971 527 ntBASIC17.12■□□□□ 0.33
PLOD3O60568 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PLOD3O60568 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.12■□□□□ 0.33
PLOD3O60568 AC140113.3-201ENST00000605663 199 ntBASIC17.12■□□□□ 0.33
PLOD3O60568 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PLOD3O60568 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.12■□□□□ 0.33
PLOD3O60568 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PLOD3O60568 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PLOD3O60568 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.11■□□□□ 0.33
PLOD3O60568 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.11■□□□□ 0.33
PLOD3O60568 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PLOD3O60568 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PLOD3O60568 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.11■□□□□ 0.33
PLOD3O60568 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.11■□□□□ 0.33
PLOD3O60568 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PLOD3O60568 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.11■□□□□ 0.33
PLOD3O60568 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.11■□□□□ 0.33
PLOD3O60568 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PLOD3O60568 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.11■□□□□ 0.33
PLOD3O60568 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.11■□□□□ 0.33
PLOD3O60568 AL023973.1-201ENST00000624619 620 ntBASIC17.11■□□□□ 0.33
PLOD3O60568 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PLOD3O60568 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PLOD3O60568 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PLOD3O60568 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PLOD3O60568 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms