Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC011840.4-201ENST00000578471 627 ntBASIC18■□□□□ 0.47
PCDHGA12O60330 AP005901.3-202ENST00000581653 237 ntBASIC18■□□□□ 0.47
PCDHGA12O60330 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA12O60330 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA12O60330 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA12O60330 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA12O60330 UBQLN4P1-201ENST00000461599 1801 ntBASIC18■□□□□ 0.47
PCDHGA12O60330 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA12O60330 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PCDHGA12O60330 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PCDHGA12O60330 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA12O60330 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA12O60330 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA12O60330 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA12O60330 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA12O60330 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA12O60330 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA12O60330 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGA12O60330 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA12O60330 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA12O60330 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA12O60330 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA12O60330 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA12O60330 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGA12O60330 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA12O60330 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGA12O60330 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGA12O60330 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA12O60330 NUS1P2-201ENST00000417358 873 ntBASIC17.99■□□□□ 0.47
PCDHGA12O60330 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA12O60330 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA12O60330 AF238378.1-201ENST00000526806 358 ntBASIC17.99■□□□□ 0.47
PCDHGA12O60330 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
PCDHGA12O60330 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGA12O60330 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA12O60330 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA12O60330 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGA12O60330 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA12O60330 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA12O60330 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGA12O60330 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA12O60330 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA12O60330 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGA12O60330 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA12O60330 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA12O60330 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA12O60330 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA12O60330 AC104581.1-202ENST00000635932 2618 ntBASIC17.98■□□□□ 0.47
PCDHGA12O60330 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 AP000593.1-201ENST00000393668 712 ntBASIC17.98■□□□□ 0.47
PCDHGA12O60330 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 PMS2P1-201ENST00000431037 1228 ntBASIC17.98■□□□□ 0.47
PCDHGA12O60330 MINOS1P3-201ENST00000457048 203 ntBASIC17.98■□□□□ 0.47
PCDHGA12O60330 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 AL671883.3-201ENST00000603274 991 ntBASIC17.98■□□□□ 0.47
PCDHGA12O60330 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA12O60330 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA12O60330 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA12O60330 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA12O60330 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA12O60330 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA12O60330 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA12O60330 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGA12O60330 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA12O60330 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA12O60330 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA12O60330 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA12O60330 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA12O60330 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA12O60330 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA12O60330 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHGA12O60330 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PCDHGA12O60330 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHGA12O60330 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGA12O60330 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA12O60330 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHGA12O60330 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA12O60330 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.97■□□□□ 0.47
PCDHGA12O60330 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.97■□□□□ 0.47
PCDHGA12O60330 AP001005.1-201ENST00000571755 1248 ntBASIC17.97■□□□□ 0.47
PCDHGA12O60330 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA12O60330 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGA12O60330 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA12O60330 IRX1P1-201ENST00000438849 1838 ntBASIC17.97■□□□□ 0.47
PCDHGA12O60330 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA12O60330 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA12O60330 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms