Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
URB1O60287 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
URB1O60287 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.13■□□□□ 0.33
URB1O60287 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.13■□□□□ 0.33
URB1O60287 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 ABCD1P5-201ENST00000445663 754 ntBASIC17.13■□□□□ 0.33
URB1O60287 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.13■□□□□ 0.33
URB1O60287 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.13■□□□□ 0.33
URB1O60287 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.13■□□□□ 0.33
URB1O60287 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
URB1O60287 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 AL512353.2-201ENST00000448759 1962 ntBASIC17.13■□□□□ 0.33
URB1O60287 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.13■□□□□ 0.33
URB1O60287 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.13■□□□□ 0.33
URB1O60287 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 AL645939.2-201ENST00000427340 991 ntBASIC17.13■□□□□ 0.33
URB1O60287 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.13■□□□□ 0.33
URB1O60287 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.13■□□□□ 0.33
URB1O60287 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.13■□□□□ 0.33
URB1O60287 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
URB1O60287 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.12■□□□□ 0.33
URB1O60287 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.12■□□□□ 0.33
URB1O60287 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
URB1O60287 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.12■□□□□ 0.33
URB1O60287 SPCS2P1-201ENST00000561636 679 ntBASIC17.12■□□□□ 0.33
URB1O60287 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.12■□□□□ 0.33
URB1O60287 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.12■□□□□ 0.33
URB1O60287 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.12■□□□□ 0.33
URB1O60287 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.12■□□□□ 0.33
URB1O60287 AC125437.2-201ENST00000625180 2167 ntBASIC17.12■□□□□ 0.33
URB1O60287 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 RCC2P3-201ENST00000418112 1537 ntBASIC17.12■□□□□ 0.33
URB1O60287 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
URB1O60287 AL356309.3-201ENST00000624132 1934 ntBASIC17.12■□□□□ 0.33
URB1O60287 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.12■□□□□ 0.33
URB1O60287 COX20P2-201ENST00000452636 358 ntBASIC17.12■□□□□ 0.33
URB1O60287 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.12■□□□□ 0.33
URB1O60287 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.12■□□□□ 0.33
URB1O60287 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.12■□□□□ 0.33
URB1O60287 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
URB1O60287 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
URB1O60287 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.11■□□□□ 0.33
URB1O60287 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
URB1O60287 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
URB1O60287 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 GABARAPL3-202ENST00000624044 1851 ntBASIC17.11■□□□□ 0.33
URB1O60287 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
URB1O60287 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
URB1O60287 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.11■□□□□ 0.33
URB1O60287 AC254562.1-201ENST00000417586 456 ntBASIC17.11■□□□□ 0.33
URB1O60287 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
URB1O60287 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms