Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PDE6DO43924 AP000593.1-201ENST00000393668 712 ntBASIC14.1□□□□□ -0.15
PDE6DO43924 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PDE6DO43924 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.1□□□□□ -0.15
PDE6DO43924 AC006557.6-201ENST00000623071 864 ntBASIC14.1□□□□□ -0.15
PDE6DO43924 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.1□□□□□ -0.15
PDE6DO43924 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.1□□□□□ -0.15
PDE6DO43924 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.1□□□□□ -0.15
PDE6DO43924 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PDE6DO43924 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PDE6DO43924 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PDE6DO43924 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PDE6DO43924 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
PDE6DO43924 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PDE6DO43924 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
PDE6DO43924 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PDE6DO43924 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PDE6DO43924 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
PDE6DO43924 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
PDE6DO43924 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PDE6DO43924 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.09□□□□□ -0.15
PDE6DO43924 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.09□□□□□ -0.15
PDE6DO43924 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.09□□□□□ -0.15
PDE6DO43924 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.09□□□□□ -0.15
PDE6DO43924 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.09□□□□□ -0.15
PDE6DO43924 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.09□□□□□ -0.15
PDE6DO43924 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.09□□□□□ -0.15
PDE6DO43924 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PDE6DO43924 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PDE6DO43924 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PDE6DO43924 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PDE6DO43924 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.09□□□□□ -0.15
PDE6DO43924 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.09□□□□□ -0.15
PDE6DO43924 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.09□□□□□ -0.15
PDE6DO43924 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.09□□□□□ -0.15
PDE6DO43924 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDE6DO43924 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
PDE6DO43924 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PDE6DO43924 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PDE6DO43924 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.08□□□□□ -0.15
PDE6DO43924 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PDE6DO43924 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
PDE6DO43924 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PDE6DO43924 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PDE6DO43924 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 AL162727.3-201ENST00000635661 2787 ntBASIC14.08□□□□□ -0.16
PDE6DO43924 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 PCDHB19P-201ENST00000570871 2371 ntBASIC14.08□□□□□ -0.16
PDE6DO43924 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 AL355312.1-201ENST00000407115 2176 ntBASIC14.08□□□□□ -0.16
PDE6DO43924 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.08□□□□□ -0.16
PDE6DO43924 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.08□□□□□ -0.16
PDE6DO43924 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.08□□□□□ -0.16
PDE6DO43924 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.08□□□□□ -0.16
PDE6DO43924 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.08□□□□□ -0.16
PDE6DO43924 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.08□□□□□ -0.16
PDE6DO43924 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.08□□□□□ -0.16
PDE6DO43924 AL121832.2-201ENST00000610979 668 ntBASIC14.08□□□□□ -0.16
PDE6DO43924 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.08□□□□□ -0.16
PDE6DO43924 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.08□□□□□ -0.16
PDE6DO43924 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 CROCCP2-202ENST00000412962 2773 ntBASIC14.08□□□□□ -0.16
PDE6DO43924 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.08□□□□□ -0.16
PDE6DO43924 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms