Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXTL3O43909 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EXTL3O43909 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.68■□□□□ 0.74
EXTL3O43909 DUTP2-201ENST00000519164 463 ntBASIC19.68■□□□□ 0.74
EXTL3O43909 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.68■□□□□ 0.74
EXTL3O43909 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.68■□□□□ 0.74
EXTL3O43909 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.68■□□□□ 0.74
EXTL3O43909 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.68■□□□□ 0.74
EXTL3O43909 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXTL3O43909 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXTL3O43909 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXTL3O43909 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXTL3O43909 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.68■□□□□ 0.74
EXTL3O43909 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXTL3O43909 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.68■□□□□ 0.74
EXTL3O43909 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXTL3O43909 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXTL3O43909 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXTL3O43909 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.67■□□□□ 0.74
EXTL3O43909 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.67■□□□□ 0.74
EXTL3O43909 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
EXTL3O43909 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EXTL3O43909 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EXTL3O43909 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
EXTL3O43909 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.67■□□□□ 0.74
EXTL3O43909 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EXTL3O43909 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EXTL3O43909 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
EXTL3O43909 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EXTL3O43909 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EXTL3O43909 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EXTL3O43909 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EXTL3O43909 KRT18P65-201ENST00000439811 1286 ntBASIC19.67■□□□□ 0.74
EXTL3O43909 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.67■□□□□ 0.74
EXTL3O43909 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
EXTL3O43909 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
EXTL3O43909 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.67■□□□□ 0.74
EXTL3O43909 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EXTL3O43909 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EXTL3O43909 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
EXTL3O43909 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.67■□□□□ 0.74
EXTL3O43909 AL390961.4-201ENST00000623958 2535 ntBASIC19.67■□□□□ 0.74
EXTL3O43909 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.67■□□□□ 0.74
EXTL3O43909 AC020763.4-201ENST00000623414 4170 ntBASIC19.67■□□□□ 0.74
EXTL3O43909 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EXTL3O43909 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EXTL3O43909 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.67■□□□□ 0.74
EXTL3O43909 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXTL3O43909 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXTL3O43909 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.66■□□□□ 0.74
EXTL3O43909 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
EXTL3O43909 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EXTL3O43909 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
EXTL3O43909 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EXTL3O43909 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXTL3O43909 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.66■□□□□ 0.74
EXTL3O43909 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXTL3O43909 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.66■□□□□ 0.74
EXTL3O43909 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
EXTL3O43909 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EXTL3O43909 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.66■□□□□ 0.74
EXTL3O43909 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.66■□□□□ 0.74
EXTL3O43909 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXTL3O43909 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EXTL3O43909 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.66■□□□□ 0.74
EXTL3O43909 BX276092.5-203ENST00000456199 560 ntBASIC19.66■□□□□ 0.74
EXTL3O43909 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.66■□□□□ 0.74
EXTL3O43909 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.66■□□□□ 0.74
EXTL3O43909 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.66■□□□□ 0.74
EXTL3O43909 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.66■□□□□ 0.74
EXTL3O43909 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.66■□□□□ 0.74
EXTL3O43909 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
EXTL3O43909 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
EXTL3O43909 AL121672.3-201ENST00000608644 468 ntBASIC19.66■□□□□ 0.74
EXTL3O43909 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.66■□□□□ 0.74
EXTL3O43909 AC009154.2-201ENST00000621177 724 ntBASIC19.66■□□□□ 0.74
EXTL3O43909 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.66■□□□□ 0.74
EXTL3O43909 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.66■□□□□ 0.74
EXTL3O43909 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.66■□□□□ 0.74
EXTL3O43909 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXTL3O43909 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.66■□□□□ 0.74
EXTL3O43909 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXTL3O43909 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.66■□□□□ 0.74
EXTL3O43909 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXTL3O43909 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.66■□□□□ 0.74
EXTL3O43909 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXTL3O43909 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXTL3O43909 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
EXTL3O43909 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms