Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 FAM8A6P-201ENST00000407496 1135 ntBASIC18.16■□□□□ 0.5
LDB2O43679 SLC25A6P5-201ENST00000435663 894 ntBASIC18.16■□□□□ 0.5
LDB2O43679 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.16■□□□□ 0.5
LDB2O43679 AC112907.2-201ENST00000448639 330 ntBASIC18.16■□□□□ 0.5
LDB2O43679 DUX4L26-201ENST00000489078 1255 ntBASIC18.16■□□□□ 0.5
LDB2O43679 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
LDB2O43679 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LDB2O43679 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.16■□□□□ 0.5
LDB2O43679 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.16■□□□□ 0.5
LDB2O43679 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.16■□□□□ 0.5
LDB2O43679 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.16■□□□□ 0.5
LDB2O43679 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.16■□□□□ 0.5
LDB2O43679 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LDB2O43679 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LDB2O43679 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB2O43679 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.16■□□□□ 0.5
LDB2O43679 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB2O43679 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB2O43679 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB2O43679 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB2O43679 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LDB2O43679 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB2O43679 AC138932.1-201ENST00000534164 6830 ntBASIC18.15■□□□□ 0.5
LDB2O43679 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB2O43679 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB2O43679 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LDB2O43679 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.15■□□□□ 0.5
LDB2O43679 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LDB2O43679 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB2O43679 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LDB2O43679 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.15■□□□□ 0.5
LDB2O43679 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
LDB2O43679 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.15■□□□□ 0.5
LDB2O43679 DUTP2-201ENST00000519164 463 ntBASIC18.15■□□□□ 0.5
LDB2O43679 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.15■□□□□ 0.5
LDB2O43679 AL445228.2-201ENST00000605589 952 ntBASIC18.15■□□□□ 0.5
LDB2O43679 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.15■□□□□ 0.5
LDB2O43679 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LDB2O43679 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LDB2O43679 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB2O43679 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB2O43679 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LDB2O43679 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LDB2O43679 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.15■□□□□ 0.5
LDB2O43679 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.15■□□□□ 0.5
LDB2O43679 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB2O43679 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB2O43679 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.15■□□□□ 0.5
LDB2O43679 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB2O43679 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.15■□□□□ 0.5
LDB2O43679 LINC00602-201ENST00000629776 2065 ntBASIC18.14■□□□□ 0.5
LDB2O43679 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.14■□□□□ 0.49
LDB2O43679 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB2O43679 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB2O43679 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.14■□□□□ 0.49
LDB2O43679 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDB2O43679 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
LDB2O43679 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.14■□□□□ 0.49
LDB2O43679 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDB2O43679 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB2O43679 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB2O43679 ARMC10P1-201ENST00000313754 855 ntBASIC18.14■□□□□ 0.49
LDB2O43679 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.14■□□□□ 0.49
LDB2O43679 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDB2O43679 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDB2O43679 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDB2O43679 AC092647.4-201ENST00000457211 535 ntBASIC18.14■□□□□ 0.49
LDB2O43679 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.14■□□□□ 0.49
LDB2O43679 AC022616.7-201ENST00000525383 220 ntBASIC18.14■□□□□ 0.49
LDB2O43679 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.14■□□□□ 0.49
LDB2O43679 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.14■□□□□ 0.49
LDB2O43679 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.14■□□□□ 0.49
LDB2O43679 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.14■□□□□ 0.49
LDB2O43679 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.14■□□□□ 0.49
LDB2O43679 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.14■□□□□ 0.49
LDB2O43679 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.14■□□□□ 0.49
LDB2O43679 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDB2O43679 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDB2O43679 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDB2O43679 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB2O43679 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.14■□□□□ 0.49
LDB2O43679 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB2O43679 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB2O43679 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LDB2O43679 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB2O43679 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.14■□□□□ 0.49
LDB2O43679 AC067852.2-201ENST00000590513 2313 ntBASIC18.14■□□□□ 0.49
LDB2O43679 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDB2O43679 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
LDB2O43679 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDB2O43679 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDB2O43679 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDB2O43679 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LDB2O43679 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDB2O43679 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDB2O43679 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LDB2O43679 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDB2O43679 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDB2O43679 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LDB2O43679 MIR662-201ENST00000384847 95 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms