Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SNAI2O43623 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.62□□□□□ -0.23
SNAI2O43623 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.62□□□□□ -0.23
SNAI2O43623 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SNAI2O43623 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SNAI2O43623 NBPF21P-201ENST00000425093 1451 ntBASIC13.61□□□□□ -0.23
SNAI2O43623 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNAI2O43623 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.61□□□□□ -0.23
SNAI2O43623 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNAI2O43623 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNAI2O43623 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.61□□□□□ -0.23
SNAI2O43623 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SNAI2O43623 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNAI2O43623 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.61□□□□□ -0.23
SNAI2O43623 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNAI2O43623 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNAI2O43623 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNAI2O43623 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.61□□□□□ -0.23
SNAI2O43623 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.61□□□□□ -0.23
SNAI2O43623 PRSS44-201ENST00000515154 1146 ntBASIC13.61□□□□□ -0.23
SNAI2O43623 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.61□□□□□ -0.23
SNAI2O43623 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNAI2O43623 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.61□□□□□ -0.23
SNAI2O43623 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.61□□□□□ -0.23
SNAI2O43623 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.61□□□□□ -0.23
SNAI2O43623 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNAI2O43623 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SNAI2O43623 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SNAI2O43623 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SNAI2O43623 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.61□□□□□ -0.23
SNAI2O43623 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.61□□□□□ -0.23
SNAI2O43623 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNAI2O43623 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SNAI2O43623 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNAI2O43623 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.61□□□□□ -0.23
SNAI2O43623 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNAI2O43623 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.61□□□□□ -0.23
SNAI2O43623 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SNAI2O43623 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SNAI2O43623 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SNAI2O43623 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 FLJ13224-201ENST00000313737 1514 ntBASIC13.6□□□□□ -0.23
SNAI2O43623 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SNAI2O43623 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SNAI2O43623 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.6□□□□□ -0.23
SNAI2O43623 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
SNAI2O43623 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.6□□□□□ -0.23
SNAI2O43623 KRT8P11-201ENST00000409686 1436 ntBASIC13.6□□□□□ -0.23
SNAI2O43623 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.6□□□□□ -0.23
SNAI2O43623 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.6□□□□□ -0.23
SNAI2O43623 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SNAI2O43623 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.6□□□□□ -0.23
SNAI2O43623 TSPY6P-201ENST00000448518 926 ntBASIC13.6□□□□□ -0.23
SNAI2O43623 AC006970.2-201ENST00000450065 779 ntBASIC13.6□□□□□ -0.23
SNAI2O43623 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.6□□□□□ -0.23
SNAI2O43623 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
SNAI2O43623 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.6□□□□□ -0.23
SNAI2O43623 Z85996.1-201ENST00000494644 937 ntBASIC13.6□□□□□ -0.23
SNAI2O43623 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SNAI2O43623 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 AC083880.1-201ENST00000608266 535 ntBASIC13.6□□□□□ -0.23
SNAI2O43623 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.6□□□□□ -0.23
SNAI2O43623 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SNAI2O43623 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.6□□□□□ -0.23
SNAI2O43623 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.6□□□□□ -0.23
SNAI2O43623 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SNAI2O43623 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.6□□□□□ -0.23
SNAI2O43623 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.6□□□□□ -0.23
SNAI2O43623 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNAI2O43623 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
SNAI2O43623 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms