Protein–RNA interactions for Protein: O15554

KCNN4, Intermediate conductance calcium-activated potassium channel protein 4, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4O15554 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNN4O15554 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.69■□□□□ 0.58
KCNN4O15554 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KCNN4O15554 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNN4O15554 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KCNN4O15554 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNN4O15554 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNN4O15554 LINC01568-207ENST00000641790 1380 ntBASIC18.69■□□□□ 0.58
KCNN4O15554 GNAS-203ENST00000306120 1878 ntBASIC18.69■□□□□ 0.58
KCNN4O15554 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNN4O15554 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KCNN4O15554 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNN4O15554 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNN4O15554 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNN4O15554 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
KCNN4O15554 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
KCNN4O15554 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KCNN4O15554 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNN4O15554 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNN4O15554 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNN4O15554 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNN4O15554 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
KCNN4O15554 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.69■□□□□ 0.58
KCNN4O15554 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.69■□□□□ 0.58
KCNN4O15554 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.69■□□□□ 0.58
KCNN4O15554 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.69■□□□□ 0.58
KCNN4O15554 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNN4O15554 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNN4O15554 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNN4O15554 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.69■□□□□ 0.58
KCNN4O15554 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KCNN4O15554 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.68■□□□□ 0.58
KCNN4O15554 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNN4O15554 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNN4O15554 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNN4O15554 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNN4O15554 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNN4O15554 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNN4O15554 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KCNN4O15554 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
KCNN4O15554 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.68■□□□□ 0.58
KCNN4O15554 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
KCNN4O15554 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.68■□□□□ 0.58
KCNN4O15554 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KCNN4O15554 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.68■□□□□ 0.58
KCNN4O15554 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.68■□□□□ 0.58
KCNN4O15554 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.68■□□□□ 0.58
KCNN4O15554 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.68■□□□□ 0.58
KCNN4O15554 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.68■□□□□ 0.58
KCNN4O15554 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.68■□□□□ 0.58
KCNN4O15554 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.68■□□□□ 0.58
KCNN4O15554 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.68■□□□□ 0.58
KCNN4O15554 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNN4O15554 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KCNN4O15554 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNN4O15554 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.68■□□□□ 0.58
KCNN4O15554 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNN4O15554 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KCNN4O15554 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.68■□□□□ 0.58
KCNN4O15554 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KCNN4O15554 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KCNN4O15554 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
KCNN4O15554 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KCNN4O15554 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
KCNN4O15554 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
KCNN4O15554 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
KCNN4O15554 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KCNN4O15554 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.67■□□□□ 0.58
KCNN4O15554 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.67■□□□□ 0.58
KCNN4O15554 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
KCNN4O15554 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.67■□□□□ 0.58
KCNN4O15554 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
KCNN4O15554 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.67■□□□□ 0.58
KCNN4O15554 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.67■□□□□ 0.58
KCNN4O15554 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.67■□□□□ 0.58
KCNN4O15554 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KCNN4O15554 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.67■□□□□ 0.58
KCNN4O15554 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.67■□□□□ 0.58
KCNN4O15554 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.67■□□□□ 0.58
KCNN4O15554 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KCNN4O15554 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KCNN4O15554 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.67■□□□□ 0.58
KCNN4O15554 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KCNN4O15554 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KCNN4O15554 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.67■□□□□ 0.58
KCNN4O15554 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.67■□□□□ 0.58
KCNN4O15554 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KCNN4O15554 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KCNN4O15554 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
KCNN4O15554 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KCNN4O15554 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNN4O15554 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.66■□□□□ 0.58
KCNN4O15554 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
KCNN4O15554 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.66■□□□□ 0.58
KCNN4O15554 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNN4O15554 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
KCNN4O15554 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNN4O15554 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
KCNN4O15554 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNN4O15554 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms