Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.37■□□□□ 0.69
O00370 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
O00370 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
O00370 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
O00370 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
O00370 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.36■□□□□ 0.69
O00370 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
O00370 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 VENTXP5-201ENST00000523979 775 ntBASIC19.36■□□□□ 0.69
O00370 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
O00370 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
O00370 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.36■□□□□ 0.69
O00370 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 PHGDH-209ENST00000641074 1780 ntBASIC19.36■□□□□ 0.69
O00370 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.36■□□□□ 0.69
O00370 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
O00370 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
O00370 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
O00370 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.35■□□□□ 0.69
O00370 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
O00370 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
O00370 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
O00370 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
O00370 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
O00370 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
O00370 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
O00370 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
O00370 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
O00370 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.35■□□□□ 0.69
O00370 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.35■□□□□ 0.69
O00370 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
O00370 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
O00370 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
O00370 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
O00370 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.35■□□□□ 0.69
O00370 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.35■□□□□ 0.69
O00370 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
O00370 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.35■□□□□ 0.69
O00370 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
O00370 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
O00370 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
O00370 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
O00370 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
O00370 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
O00370 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.35■□□□□ 0.69
O00370 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
O00370 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
O00370 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
O00370 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
O00370 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.34■□□□□ 0.69
O00370 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
O00370 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.34■□□□□ 0.69
O00370 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
O00370 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.34■□□□□ 0.69
O00370 MIR662-201ENST00000384847 95 ntBASIC19.34■□□□□ 0.69
O00370 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.34■□□□□ 0.69
O00370 AL031133.1-201ENST00000406807 723 ntBASIC19.34■□□□□ 0.69
O00370 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.34■□□□□ 0.69
O00370 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.34■□□□□ 0.69
O00370 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
O00370 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
O00370 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
O00370 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
O00370 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
O00370 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
O00370 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
O00370 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.34■□□□□ 0.69
O00370 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
O00370 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
O00370 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
O00370 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.33■□□□□ 0.69
O00370 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.33■□□□□ 0.69
O00370 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
O00370 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
O00370 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
O00370 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
O00370 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.33■□□□□ 0.68
O00370 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.33■□□□□ 0.68
O00370 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.33■□□□□ 0.68
O00370 ZNF444P1-201ENST00000559497 298 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms