Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.15■□□□□ 0.34
CLIC1O00299 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC1O00299 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CLIC1O00299 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLIC1O00299 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLIC1O00299 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLIC1O00299 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.14■□□□□ 0.33
CLIC1O00299 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC1O00299 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CLIC1O00299 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.14■□□□□ 0.33
CLIC1O00299 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC1O00299 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC1O00299 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC1O00299 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC1O00299 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CLIC1O00299 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC1O00299 GCSHP5-201ENST00000443090 522 ntBASIC17.14■□□□□ 0.33
CLIC1O00299 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC1O00299 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.14■□□□□ 0.33
CLIC1O00299 AC009065.1-201ENST00000564055 1225 ntBASIC17.14■□□□□ 0.33
CLIC1O00299 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC1O00299 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC1O00299 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC1O00299 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC1O00299 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.14■□□□□ 0.33
CLIC1O00299 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC1O00299 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC1O00299 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC1O00299 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC1O00299 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
CLIC1O00299 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.14■□□□□ 0.33
CLIC1O00299 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.14■□□□□ 0.33
CLIC1O00299 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.13■□□□□ 0.33
CLIC1O00299 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CLIC1O00299 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CLIC1O00299 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.13■□□□□ 0.33
CLIC1O00299 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.13■□□□□ 0.33
CLIC1O00299 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.13■□□□□ 0.33
CLIC1O00299 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.13■□□□□ 0.33
CLIC1O00299 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.13■□□□□ 0.33
CLIC1O00299 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CLIC1O00299 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLIC1O00299 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CLIC1O00299 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.13■□□□□ 0.33
CLIC1O00299 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.13■□□□□ 0.33
CLIC1O00299 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC1O00299 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.12■□□□□ 0.33
CLIC1O00299 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC1O00299 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC1O00299 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLIC1O00299 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.12■□□□□ 0.33
CLIC1O00299 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC1O00299 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLIC1O00299 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC1O00299 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC1O00299 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.12■□□□□ 0.33
CLIC1O00299 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC1O00299 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC1O00299 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC1O00299 AP003071.4-201ENST00000562276 1284 ntBASIC17.12■□□□□ 0.33
CLIC1O00299 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.12■□□□□ 0.33
CLIC1O00299 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC1O00299 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.12■□□□□ 0.33
CLIC1O00299 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CLIC1O00299 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC1O00299 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC1O00299 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CLIC1O00299 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.12■□□□□ 0.33
CLIC1O00299 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC1O00299 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC1O00299 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC1O00299 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLIC1O00299 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC1O00299 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms