Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MIR6805-201ENST00000615055 62 ntBASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 AL691432.2-201ENST00000607222 2038 ntBASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 KRT8P50-201ENST00000562022 1438 ntBASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 MIR658-201ENST00000385210 100 ntBASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 TMEM261P1-201ENST00000604899 340 ntBASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC85CA6NKD9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 AC026120.1-201ENST00000611536 926 ntBASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 AL163051.1-201ENST00000569214 1512 ntBASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC85CA6NKD9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 SIGLEC16-201ENST00000599858 1437 ntBASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 KRT18P32-201ENST00000424695 1287 ntBASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 AP001059.3-201ENST00000619053 235 ntBASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CCDC85CA6NKD9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms