Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 LINC00602-201ENST00000629776 2065 ntBASIC12.93□□□□□ -0.34
LINC01549A6NIU2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 AL118508.1-201ENST00000613502 2345 ntBASIC12.93□□□□□ -0.34
LINC01549A6NIU2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 KRT18P61-201ENST00000585825 1298 ntBASIC12.93□□□□□ -0.34
LINC01549A6NIU2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01549A6NIU2 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 AC016769.1-201ENST00000409132 1010 ntBASIC12.92□□□□□ -0.34
LINC01549A6NIU2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
LINC01549A6NIU2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 AC068418.2-201ENST00000577309 3703 ntBASIC12.91□□□□□ -0.34
LINC01549A6NIU2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 AP001094.4-201ENST00000579008 2176 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms