Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AL773604.1-201ENST00000617417 272 ntBASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.41■□□□□ 0.54
TBC1D3BA6NDS4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 AL590627.1-203ENST00000421194 1026 ntBASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 KRT18P65-201ENST00000439811 1286 ntBASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 AF186996.4-201ENST00000467186 377 ntBASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 AP001005.1-201ENST00000571755 1248 ntBASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 AC120114.3-201ENST00000611923 658 ntBASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3BA6NDS4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TBC1D3BA6NDS4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.39■□□□□ 0.54
TBC1D3BA6NDS4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
TBC1D3BA6NDS4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TBC1D3BA6NDS4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TBC1D3BA6NDS4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.39■□□□□ 0.54
TBC1D3BA6NDS4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3BA6NDS4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 KRT18P67-201ENST00000432816 1264 ntBASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 AL138831.2-201ENST00000606564 490 ntBASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 BX640515.1-201ENST00000617215 977 ntBASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3BA6NDS4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms