Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 AC106886.4-201ENST00000623557 2502 ntBASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 AC004951.3-201ENST00000418645 1148 ntBASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 AC105020.1-201ENST00000435356 2205 ntBASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV3S1A0A5B6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 TSPY6P-201ENST00000448518 926 ntBASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV3S1A0A5B6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 MCCD1P1-208ENST00000445732 328 ntBASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 KRT16P5-201ENST00000455284 522 ntBASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 DUTP2-201ENST00000519164 463 ntBASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 MTDHP1-201ENST00000605323 784 ntBASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV3S1A0A5B6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms