Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV9-2A0A087WT02 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 PCDHA1-201ENST00000378133 2726 ntBASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 AL121906.2-201ENST00000621597 723 ntBASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 AC073648.6-201ENST00000641589 218 ntBASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 AP001094.4-201ENST00000579008 2176 ntBASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV9-2A0A087WT02 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 DOC2GP-204ENST00000639052 2548 ntBASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 AC142381.4-202ENST00000563973 229 ntBASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms