Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
DDX49Q9Y6V7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
DDX49Q9Y6V7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
DDX49Q9Y6V7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
DDX49Q9Y6V7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
DDX49Q9Y6V7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
DDX49Q9Y6V7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
DDX49Q9Y6V7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
DDX49Q9Y6V7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 RNF152P1-201ENST00000397754 604 ntBASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 AL031133.1-201ENST00000406807 723 ntBASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 AL441883.1-201ENST00000566170 1045 ntBASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 AC010653.2-201ENST00000623505 997 ntBASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 PRORSD1P-202ENST00000563365 2154 ntBASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX49Q9Y6V7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 TSPY5P-201ENST00000426936 936 ntBASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 COX11P1-201ENST00000489116 835 ntBASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC21.81■■□□□ 1.08
DDX49Q9Y6V7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDX49Q9Y6V7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms