Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 VENTXP5-201ENST00000523979 775 ntBASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 ZNF444P1-201ENST00000559497 298 ntBASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 AC009065.1-201ENST00000564055 1225 ntBASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 AP000550.4-202ENST00000639755 178 ntBASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 AL391807.1-203ENST00000604392 2365 ntBASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 AC073592.3-201ENST00000625118 1834 ntBASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 LTB4R2-202ENST00000528054 3092 ntBASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 MIR3180-4-201ENST00000582223 153 ntBASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 AC090164.3-201ENST00000610780 2143 ntBASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
RPH3AQ9Y2J0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms