Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC005332.7-201ENST00000614046 2005 ntBASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC28■■■□□ 2.07
CDK11AQ9UQ88 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CDK11AQ9UQ88 AC097374.2-201ENST00000618617 1306 ntBASIC28■■■□□ 2.07
CDK11AQ9UQ88 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
CDK11AQ9UQ88 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CDK11AQ9UQ88 INIP-202ENST00000374236 874 ntTSL 2 BASIC28■■■□□ 2.07
CDK11AQ9UQ88 COX5A-202ENST00000562233 441 ntTSL 3 BASIC28■■■□□ 2.07
CDK11AQ9UQ88 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC28■■■□□ 2.07
CDK11AQ9UQ88 NKAPP1-205ENST00000585790 367 ntBASIC28■■■□□ 2.07
CDK11AQ9UQ88 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC28■■■□□ 2.07
CDK11AQ9UQ88 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC28■■■□□ 2.07
CDK11AQ9UQ88 AC107918.4-202ENST00000641623 219 ntBASIC28■■■□□ 2.07
CDK11AQ9UQ88 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC28■■■□□ 2.07
CDK11AQ9UQ88 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC28■■■□□ 2.07
CDK11AQ9UQ88 RNF165-205ENST00000588679 2904 ntBASIC28■■■□□ 2.07
CDK11AQ9UQ88 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CDK11AQ9UQ88 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC28■■■□□ 2.07
CDK11AQ9UQ88 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 AC005104.2-201ENST00000427818 678 ntBASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 RNA5SP415-201ENST00000517246 115 ntBASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 MTDHP4-201ENST00000600287 670 ntBASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 AL356488.2-201ENST00000602755 427 ntBASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDK11AQ9UQ88 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC27.98■■■□□ 2.07
CDK11AQ9UQ88 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 AC105339.3-201ENST00000560043 636 ntBASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDK11AQ9UQ88 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 IMP4-203ENST00000409935 958 ntTSL 5 BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
CDK11AQ9UQ88 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
CDK11AQ9UQ88 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
CDK11AQ9UQ88 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC27.95■■■□□ 2.07
CDK11AQ9UQ88 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.06
CDK11AQ9UQ88 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC27.95■■■□□ 2.06
CDK11AQ9UQ88 NMU-202ENST00000505262 693 ntTSL 3 BASIC27.95■■■□□ 2.06
CDK11AQ9UQ88 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC27.95■■■□□ 2.06
CDK11AQ9UQ88 MSRA-206ENST00000521209 814 ntTSL 3 BASIC27.95■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms